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Author Topic:   The Truth About Evolution and Religion
dkroemer
Member (Idle past 5075 days)
Posts: 125
From: Brooklyn, New York
Joined: 05-15-2010


Message 256 of 419 (561382)
05-20-2010 8:43 AM
Reply to: Message 255 by Huntard
05-20-2010 7:18 AM


Re: But we do know of other factors
No, I can't. There is however an analogy. Suppose we are in a jungle and we see a pretty flower. Suppose you say: Prove to me the flower is not an illusion. That would be the sign of a deep thinker.
But if we see a tiger, such thinking is irrational and irresponsible because we have to decide which way to run.
We have to make a decision about revelation. If we make the wrong decision we might end up howling. The nickel and dime arguments you use to refute my arguments are irrational.

This message is a reply to:
 Message 255 by Huntard, posted 05-20-2010 7:18 AM Huntard has replied

Replies to this message:
 Message 257 by Huntard, posted 05-20-2010 9:00 AM dkroemer has replied

  
Huntard
Member (Idle past 2316 days)
Posts: 2870
From: Limburg, The Netherlands
Joined: 09-02-2008


Message 257 of 419 (561383)
05-20-2010 9:00 AM
Reply to: Message 256 by dkroemer
05-20-2010 8:43 AM


Re: But we do know of other factors
dkroemer writes:
No, I can't. There is however an analogy. Suppose we are in a jungle and we see a pretty flower. Suppose you say: Prove to me the flower is not an illusion. That would be the sign of a deep thinker.
Deep thinker? I think it's a bit stupid to demand of someone else to prove the flower is not an illusion. There's no way he can do that. Hell, I couldn't even prove to myself that flower isn't an illusion.
But if we see a tiger, such thinking is irrational and irresponsible because we have to decide which way to run.
So?
We have to make a decision about revelation.
Revalation? Do you mean reality?
If we make the wrong decision we might end up howling.
Yes. However, we don't just know the "right" decission, that's arrived at after waying the evidence.
The nickel and dime arguments you use to refute my arguments are irrational.
How the hell does that follow from what you said before? And please show how they are irtrational. Will you final start answering questions, or will even more mumbo jumbo follow?

This message is a reply to:
 Message 256 by dkroemer, posted 05-20-2010 8:43 AM dkroemer has replied

Replies to this message:
 Message 264 by dkroemer, posted 05-20-2010 11:46 AM Huntard has not replied

  
Blue Jay
Member (Idle past 2719 days)
Posts: 2843
From: You couldn't pronounce it with your mouthparts
Joined: 02-04-2008


Message 258 of 419 (561395)
05-20-2010 10:25 AM
Reply to: Message 218 by dkroemer
05-19-2010 3:25 PM


Re: and yet, curiously, it is still explained by evolution ...
Hi, Roemer.
dkroemer writes:
They never say that facilitated variation explains the complexity of life.
At this point, I need to ask again what you mean by complexity.
If you read the 2007 PNAS paper I linked in my last message, you will see that Gerhart and Kirscher argue that several major core processes arose via evolution at four different turning points in evolutionary history. You will then read how they believe that mutations to these core processes and their sub-processes are largely responsible for all the diversity of life.
This, to me, sounds like they are proposing evolution to explain the complexity of life. But, perhaps you mean something different by complexity, something other than the core processes and all their variations; in which case I ask you to explain what you mean.
This, dear sir, means that they attribute everything about life’s form and function to naturalistic evolution. You could wave it off as mere concessions to the humanist-atheist big men who rule the scientific world in order to get facilitated variation published (as you have), but then you’d be resorting to irrational conspiracy theories to rationalize a personal belief that contradicts observable facts.
Edited by Bluejay, : The number four.

-Bluejay (a.k.a. Mantis, Thylacosmilus)
Darwin loves you.

This message is a reply to:
 Message 218 by dkroemer, posted 05-19-2010 3:25 PM dkroemer has not replied

Replies to this message:
 Message 262 by Wounded King, posted 05-20-2010 11:23 AM Blue Jay has replied

  
New Cat's Eye
Inactive Member


Message 259 of 419 (561396)
05-20-2010 10:32 AM
Reply to: Message 243 by dkroemer
05-20-2010 12:59 AM


Re: But we do know of other factors
When an object slides on a table and friction slows it down, the kinetic energy is lost. It is not conserved. Scientists solved the problem by inventing a new energy: internal energy or heat energy. The kinetic energy is transformed into heat energy.
The Total Energy is conserved, not just the kinetic energy. And we know that kinetic energy is transered into heat energy because we can measure the temperature of the body and see that it has gone up. Like, your tires getting hot after driving on them... where do you think that heat comes from? Hell, just rub your palms together and you can feal the warmth.
Are you just jerkin' my chain here? This is unbelievable.
The calculation I gave does not take into consideration natural selection and facilitated variation.
Then the calculation is worthless. It doesn't represent anything in reality. Proteins would not have just randomly assembled. There's other factors involved.
So, to repeat:
You're mistaken about the 2nd Law of Thermodynamics, it doesn't have anything to do with evolution, and evolution does not violate it.
Also, you're calculation of the probability of a protein forming is worthless and has nothing to do with evolution.

This message is a reply to:
 Message 243 by dkroemer, posted 05-20-2010 12:59 AM dkroemer has not replied

  
Taq
Member
Posts: 10038
Joined: 03-06-2009
Member Rating: 5.3


Message 260 of 419 (561402)
05-20-2010 11:13 AM
Reply to: Message 239 by dkroemer
05-20-2010 12:44 AM


Re: But we do know of other factors
I understand that a lot of layman think Darwinism explains the complexity of life. But biologists know better.
Really? Here is an abstract from a paper where they use evolution to explain the complexity of eyes.
quote:
BMC Evol Biol. 2010 Apr 30;10(1):123. [Epub ahead of print]
Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach.
Rivera AS, Pankey MS, Plachetzki DC, Villacorta C, Syme AE, Serb JM, Omilian AR, Oakley TH.
ABSTRACT: BACKGROUND: Duplication and divergence of genes and genetic networks is hypothesized to be a major driver of the evolution of complexity and novel features. Here, we examine the history of genes and genetic networks in the context of eye evolution by using new approaches to understand patterns of gene duplication during the evolution of metazoan genomes. We hypothesize that 1) genes involved in eye development and phototransduction have duplicated and were retained at higher rates in animal clades that possess more distinct types of optical design; and 2) genes with functional relationships were duplicated and lost together, thereby preserving genetic networks. To test these hypotheses, we examine the rates and patterns of gene duplication and loss evident in 19 metazoan genomes, including that of Daphnia pulex - the first completely sequenced crustacean genome. This is of particular interest because the pancrustaceans (hexapods+crustaceans) have more optical designs than any other major clade of animals, allowing us to test specifically whether the high amount of disparity in pancrustacean eyes is correlated with a higher rate of duplication and retention of vision genes. RESULTS: Using protein predictions from 19 metazoan whole-genome projects, we found all members of 23 gene families known to be involved in eye development or phototransduction and deduced their phylogenetic relationships. This allowed us to estimate the number and timing of gene duplication and loss events in these gene families during animal evolution. When comparing duplication/retention rates of these genes, we found that the rate was significantly higher in pancrustaceans than in either vertebrates or non-pancrustacean protostomes. Comparing patterns of co-duplication across Metazoa showed that while these eye-genes co-duplicate at a significantly higher rate than those within a randomly shuffled matrix, many genes with known functional relationships in model organisms did not co-duplicate more often than expected by chance. CONCLUSIONS: Overall, and when accounting for factors such as differential rates of whole-genome duplication in different groups, our results are broadly consistent with the hypothesis that genes involved in eye development and phototransduction duplicate at a higher rate in Pancrustacea, the group with the greatest variety of optical designs. The result that these genes have a significantly high number of co-duplications and co-losses could be influenced by shared functions or other unstudied factors such as synteny. Since we did not observe co-duplication/co-loss of genes for all known functional modules (e.g. specific regulatory networks), the interactions among suites of known co-functioning genes (modules) may be plastic at the temporal scale of analysis performed here. Other factors in addition to gene duplication - such as cis-regulation, heterotopy, and co-option - are also likely to be strong factors in the diversification of eye types.
A search for "evolution complexity" at http://www.pubmed.com returns over 3,000 hits. Perhaps you should do some reading before making such bold claims.

This message is a reply to:
 Message 239 by dkroemer, posted 05-20-2010 12:44 AM dkroemer has replied

Replies to this message:
 Message 263 by dkroemer, posted 05-20-2010 11:44 AM Taq has not replied

  
Taq
Member
Posts: 10038
Joined: 03-06-2009
Member Rating: 5.3


Message 261 of 419 (561403)
05-20-2010 11:16 AM
Reply to: Message 244 by dkroemer
05-20-2010 1:02 AM


Re: But we do know of other factors
The soul is not a religious belief.
Yes, it is. Or have you never heard of missionaries trying to save souls?
It is a metaphysical category that biologists need to justify not including free will and conscious knowledge in their textbooks.
Why do biologists need to justify your religious beliefs? Consciousness is a matter for neurobiology and it has nothing to do with souls.
Biologists only study the bodies of humans, not their souls.
Biologists don't study flying reindeer, either. Do you wonder why?

This message is a reply to:
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Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 262 of 419 (561404)
05-20-2010 11:23 AM
Reply to: Message 258 by Blue Jay
05-20-2010 10:25 AM


Mixed up literature
you will see that Gerhart and Kirscher argue that four major core processes arose via evolution at four different turning points in evolutionary history. You will then read how they believe that mutations to these four core processes and their sub-processes are largely responsible for all the diversity of life.
You won't really. While they do identify four 'turning points' each turning point has several core processes associated with it. The first turning point, around Three billion years ago, has core functional components/processes of ...
Gerhart and Kirschner writes:
Components of energy metabolism, biosynthesis of the 60 building blocks, DNA replication, DNA transcription to RNA, translation of RNA to protein, lipid membrane synthesis, transmembrane transport
... ascribed to it.
I think you are confusing the four time periods in which they propose certain conserved core component/processes arose with the four steps they outline as giving rise to viable phenotypic variation of anatomy and physiology from genetic variation.
TTFN,
WK

This message is a reply to:
 Message 258 by Blue Jay, posted 05-20-2010 10:25 AM Blue Jay has replied

Replies to this message:
 Message 266 by Blue Jay, posted 05-20-2010 11:58 AM Wounded King has replied

  
dkroemer
Member (Idle past 5075 days)
Posts: 125
From: Brooklyn, New York
Joined: 05-15-2010


Message 263 of 419 (561407)
05-20-2010 11:44 AM
Reply to: Message 260 by Taq
05-20-2010 11:13 AM


Re: But we do know of other factors
This abstract supports my contention. It says
"Duplication and divergence of genes and genetic networks is hypothesized to be a major driver of the evolution of complexity and novel features".
This does not say "Duplication and divergence of genes and genetic networks explains the complexity of life." Note the word "hypothesized" and "major driver".

This message is a reply to:
 Message 260 by Taq, posted 05-20-2010 11:13 AM Taq has not replied

  
dkroemer
Member (Idle past 5075 days)
Posts: 125
From: Brooklyn, New York
Joined: 05-15-2010


Message 264 of 419 (561409)
05-20-2010 11:46 AM
Reply to: Message 257 by Huntard
05-20-2010 9:00 AM


Re: But we do know of other factors
I have trouble believing you don't understand what I am saying.

This message is a reply to:
 Message 257 by Huntard, posted 05-20-2010 9:00 AM Huntard has not replied

  
RAZD
Member (Idle past 1426 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 265 of 419 (561410)
05-20-2010 11:55 AM
Reply to: Message 238 by dkroemer
05-20-2010 12:33 AM


of cards and comedians
Hi dkroemer, still trying to remake reality?
However, it is not evolution that violates the second law. What violates the second law is the theory of natural selection.
Which is also not a closed system. Species survival is a matter of interactions with the whole ecology surrounding the species.
The evidence that this is actually true is quite prevalent: natural selection has been observed frequently, and as such the occurrence of natural selection is a fact of reality. If indeed this violates the second law, then this simple fact invalidates the second law -- it certainly invalidates your misuse of it.
It does not violate the second law for one person at a bridge table to get 13 of a single suit. But it does violate the second law for all four persons to get perfect bridge hands.
Curiously, it matters not one whit of ant frass in Antarctica to entropy what the color and pattern the cards in any hand happen to be. The energy levels of the cards are the same regardless of the patterns on the cards. An ace does not have any more or less energy than a deuce.
If four hands in a bridge game are perfect, the deck was not shuffled.
Hilarious, and also flatulently false. If the deck was not shuffle, but new out of the pack, you would not have a perfect bridge hand in any of the hands.
It is also not impossible for a deck to be arranged during shuffling into one specific arrangement, having it match a pre-chosen arrangement is just a matter of probability not impossibility.
You are now confusing probability with entropy, much to my amusement.
The theory that there were four perfect hands by chance is irrational and violates the second law.
And unfortunately, for you, the "theory of four perfect hands" has nothing to do with natural selection in particular or with evolution in general.
Message 248
The odds of a shuffled deck producing the same order of cards that manufacturers use are one in 52 X 51 X 50 .... The odds of getting four perfect bridge hands is less.
Wrong, fragrantly wrong.
The odds of shuffling the deck into any one predetermined arrangement is exactly the same as for any other predetermined arrangement.
However, there are 4x3x2x1 possible arrangements of the deck that result in four perfect bridge hands and thus the probability of getting ONE of these arrangements is 24 times as great as for reproducing the manufacturer's arrangement.
Enjoy
Edited by RAZD, : added more

we are limited in our ability to understand
by our ability to understand
Rebel American Zen Deist
... to learn ... to think ... to live ... to laugh ...
to share.


• • • Join the effort to solve medical problems, AIDS/HIV, Cancer and more with Team EvC! (click) • • •

This message is a reply to:
 Message 238 by dkroemer, posted 05-20-2010 12:33 AM dkroemer has replied

Replies to this message:
 Message 271 by dkroemer, posted 05-20-2010 2:32 PM RAZD has replied

  
Blue Jay
Member (Idle past 2719 days)
Posts: 2843
From: You couldn't pronounce it with your mouthparts
Joined: 02-04-2008


Message 266 of 419 (561411)
05-20-2010 11:58 AM
Reply to: Message 262 by Wounded King
05-20-2010 11:23 AM


Re: Mixed up literature
Hi, Wounded King.
Wounded King writes:
I think you are confusing the four time periods in which they propose certain conserved core component/processes arose with the four steps they outline as giving rise to viable phenotypic variation of anatomy and physiology from genetic variation.
No, I'm referring to this part:
quote:
And of course, protein evolution was very important in the four episodes of pre-Cambrian innovation described previously. For the most part, though, animals since the Cambrian have repeatedly reused the processes and components that had been evolved long beforehand to generate novel traits of anatomy and physiology.
p 8584, end of the first full paragraph
Edited by Bluejay, : misplaced bolding

-Bluejay (a.k.a. Mantis, Thylacosmilus)
Darwin loves you.

This message is a reply to:
 Message 262 by Wounded King, posted 05-20-2010 11:23 AM Wounded King has replied

Replies to this message:
 Message 269 by Wounded King, posted 05-20-2010 12:34 PM Blue Jay has replied

  
RAZD
Member (Idle past 1426 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 267 of 419 (561412)
05-20-2010 12:25 PM
Reply to: Message 239 by dkroemer
05-20-2010 12:44 AM


Fascinatingly, evolution still explains the diversity of life and relative complexity
Hi dkroemer
That is correct. I understand that a lot of layman think Darwinism explains the complexity of life. But biologists know better.
You are correct, a lot of laymen think that evolution does not explain the complexity of life. But biologists know better.
Curiously, I can substantiate what I say with references that show this to be so, according to evolution, as I did in Message 235:
quote:
http://www.globalchange.umich.edu/..._life/complex_life.html
• The history of life involves enormous change. Major life forms have appeared, flourished, and died out. Reptiles ruled the earth for nearly 200 million years. Yet, like most species and many life forms (families, orders, even phyla), the dinosaurs are gone, replaced by life forms that either were biologically superior, or just luckier. At some points in earth history many species went extinct in a short time. These are called mass extinctions, a topic we will revisit shortly.
• Over time, life has become more diverse and more complex (although it can be argued that complexity lies in the eye of the beholder). The increase in the number of families of marine vertebrates and invertebrates throughout the Phanerozoic Eon illustrates this clearly (see figure below). The number of families of marine organisms has increased slowly over geological time.
And, of course, we now know that this is true because you have said that UMich is telling the truth.
When I put the question to Terrance Deacon (this conversation is on the internet) he tergiversated. He knew perfectly well from the context of my remarks that I was looking for an acknowledgement of the limitations of Darwinism. He let everyone think that the question of how life got so complex has been solved.
Which of course, is (amusingly) still totally irrelevant to the issue of evolution, and whether the diversity of life as we know it is explained by evolution, including all the mechanisms that cause change in the types and frequencies of hereditary traits in breeding populations from generation to generation in response to ecological opportunity.
From Message 235 again:
quote:
The Process of Speciation
Biological evolution can be defined in two ways: as a result of changes in the genetic composition of a population with the passage of each generation (microevolution), or as a result of the gradual change of living things from one form into another over the course of time, generating species diversity (macroevolution).
Species formation can occur either through allopatric (geographic) speciation or through sympatric speciation.
quote:
Speciation results in the splitting of an ancestral species into two (or more) descendent species. This process, continued indefinitely, results in a sequence of speciation events extending over great expanses of time, resulting in a branching tree of historical relatedness. Imagine if we had complete and certain knowledge of such a tree -- it would tell us the evolutionary relatedness among living things, the pathways of divergence, even the timing of separation.
There are two ways to construct a phylogenetic tree (see Figure). We can use a "perfect" fossil record to trace the sequence from beginning to end, or we can use similarities and differences among living things to reconstruct history, working from the endpoint toward the beginning.
In this course, we will not consider these two methods in detail. I introduce them to make the point that, ultimately, we want to understand how evolution produces not just two species from one but the entire tree of life. This requires that we make the transition from microevolution to macroevolution. To Darwin, and to modern evolutionary biologists as well, the answer simply is time. Given enough time and successive splittings, the processes that produce two species from one will result in the entire diversity of life.
Evolution explains speciation, and speciation and evolution explain the "entire diversity of life" as we know it.
Curiously, this is what I have been telling you for some time now ...
And again, amusingly, we know that this is true now, because you have said that UMich is telling the truth.
Enjoy.
Edited by RAZD, : subtitle

we are limited in our ability to understand
by our ability to understand
Rebel American Zen Deist
... to learn ... to think ... to live ... to laugh ...
to share.


• • • Join the effort to solve medical problems, AIDS/HIV, Cancer and more with Team EvC! (click) • • •

This message is a reply to:
 Message 239 by dkroemer, posted 05-20-2010 12:44 AM dkroemer has replied

Replies to this message:
 Message 270 by dkroemer, posted 05-20-2010 2:24 PM RAZD has replied

  
RAZD
Member (Idle past 1426 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 268 of 419 (561413)
05-20-2010 12:33 PM
Reply to: Message 243 by dkroemer
05-20-2010 12:59 AM


Inventing Energy
You really are a comedian, dkroemer.
When an object slides on a table and friction slows it down, the kinetic energy is lost. It is not conserved. Scientists solved the problem by inventing a new energy: internal energy or heat energy. The kinetic energy is transformed into heat energy.
Interestingly, they also measured the heat energy, verified it existed, and through experiment were able to show that this explained the loss of motion due to friction.
Of course this energy never existed before these scientists invented it.
Amusingly, now that it has been invented you have to put oil and coolant in your car to prevent the buildup of heat energy from friction from causing damage to the car. How much simpler it would be if they had not invented it eh?
Enjoy.

we are limited in our ability to understand
by our ability to understand
Rebel American Zen Deist
... to learn ... to think ... to live ... to laugh ...
to share.


• • • Join the effort to solve medical problems, AIDS/HIV, Cancer and more with Team EvC! (click) • • •

This message is a reply to:
 Message 243 by dkroemer, posted 05-20-2010 12:59 AM dkroemer has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 269 of 419 (561414)
05-20-2010 12:34 PM
Reply to: Message 266 by Blue Jay
05-20-2010 11:58 AM


Re: Mixed up literature
Sorry Bluejay, your quote doesn't make things any clearer. Can you tell me what the "four major core processes" are that you talked about in Message 266 and when you think each one arose? Take my previous Message 269 as a starting point, which of the seven core processes listed there do you think they consider the 'major' one for that time period?
You kept on saying there were four core processes, but I can't find anything in the paper to support that. Four rough geological periods of innovation yes. Four steps from genetic variation to viable phenotypic variation of anatomy and physiology. yes. Four core processes, no, more like 30 odd.
TTFN,
WK
Edited by Wounded King, : No reason given.

This message is a reply to:
 Message 266 by Blue Jay, posted 05-20-2010 11:58 AM Blue Jay has replied

Replies to this message:
 Message 277 by Blue Jay, posted 05-20-2010 4:47 PM Wounded King has not replied

  
dkroemer
Member (Idle past 5075 days)
Posts: 125
From: Brooklyn, New York
Joined: 05-15-2010


Message 270 of 419 (561432)
05-20-2010 2:24 PM
Reply to: Message 267 by RAZD
05-20-2010 12:25 PM


Re: Fascinatingly, evolution still explains the diversity of life and relative comple
Thank you for the following quote from the U. of Mich:
"Over time, life has become more diverse and more complex"
There is nothing here about there being an explanation for the complexity. This is not true of the Berkeley lesson. The Berkely lesson says natural selection explains complexity.

This message is a reply to:
 Message 267 by RAZD, posted 05-20-2010 12:25 PM RAZD has replied

Replies to this message:
 Message 278 by RAZD, posted 05-20-2010 10:03 PM dkroemer has replied

  
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