isn't there only really one way to do science whether one is a believer or not?
That does seem to be the case, and it is why we do not see research papers that confirm ID. If the Scientific Method is used correctly it never leads to conclusions that involve the supernatural because there is no known way to test things outside of nature.
My understanding about the Discovery Institute is that people associated with it have to sign some sort of declaration that belief in the bible overrides scientific results, or something similar.
What if Eleanor Roosevelt had wings? -- Monty Python
One important characteristic of a theory is that is has survived repeated attempts to falsify it. Contrary to your understanding, all available evidence confirms it. --Subbie
If evolution is shown to be false, it will be at the hands of things that are true, not made up. --percy
The reason that we have the scientific method is because common sense isn't reliable. -- Taq