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Author Topic:   The value of Gitt information
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 1 of 24 (329525)
07-07-2006 5:29 AM


In the Role of Mutations thread Scrutinizer has suggested that Gitt information would be the meaningful measure of information content for genetics rather than Shannon information/entropy. Leaving the comparative merits of Shannon and Gitt information I can't actually see how gitt information can possibly be measured without making a whole host of unwarranted assumption.
AIG host a paper by Gitt discussing his measure of information.
Gitt puts forward a number of empirical principles concerning information which to me look like nothing but complete assumptions based on a preconcieved endpoint.
1. No information can exist without a code.
2. No code can exist without a free and deliberate convention.
3. No information can exist without the five hierarchical levels: statistics, syntax, semantics, pragmatics and apobetics.
4. No information can exist in purely statistical processes.
5. No information can exist without a transmitter.
6. No information chain can exist without a mental origin.
7. No information can exist without an initial mental source; that is, information is, by its nature, a mental and not a material quantity.
8. No information can exist without a will.
In what way are these empirical principles? In the absence of a way to actually measure Gitt information, something Gitt unaccountably forgets to provide, all we are left with is subjective pontifications and no way to conceivably support these 'priniciples' empirically.
I wonder how Gitt would describe all the information we glean daily from the natural world, perhaps he would ascribe that ultimately to an intelligent source as well or come up with an alternative term for it rather than information.
Is there any way to actually measure Gitt information?
We will never be able to show creationists an increase in genetic information if they will not agree on a quantititative measure of information they are prepared to accept.
Is Gitt information useful as anything other than a vague and shifty goalpost for creationists to use?
TTFN,
WK

Replies to this message:
 Message 3 by PaulK, posted 07-07-2006 6:12 AM Wounded King has replied
 Message 5 by mark24, posted 07-07-2006 7:48 AM Wounded King has not replied
 Message 6 by Coragyps, posted 07-07-2006 8:03 AM Wounded King has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 4 of 24 (329536)
07-07-2006 6:18 AM
Reply to: Message 3 by PaulK
07-07-2006 6:12 AM


I'll take that as a no then.
TTFN,
WK

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Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 10 of 24 (329875)
07-08-2006 1:59 PM
Reply to: Message 9 by Cal
07-08-2006 1:22 AM


Your point was that you were wrong?
What Percy wrote gives no indication that Shannon made any implicit assumption that any given message originated with an intelligent source, only meaning.
People do apply Shannon entropy analysis to DNA, are you saying that this is a misapplication?
TTFN,
WK

This message is a reply to:
 Message 9 by Cal, posted 07-08-2006 1:22 AM Cal has replied

Replies to this message:
 Message 11 by Cal, posted 07-10-2006 11:28 AM Wounded King has replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 12 of 24 (330354)
07-10-2006 12:17 PM
Reply to: Message 11 by Cal
07-10-2006 11:28 AM


A likely component of any robust attempt at defining "intelligence" would be the ability to manipulate symbols and to attribute "meaning" to them (and, conversely, defining "meaning" would be tough to do without referring to "intelligence"). Shannon's definition of "message" didn't need to specify an origin, because he was dealing with structures explicitly designed by intelligent beings for the express purpose of exchanging coded messages. See how that works?
In what way is he dealing with structures 'explicitly' designed by intelligent beings? By generalising his formulation Shannon allows it to cover any situation in which a signal is being transmitted over a noisy channel, that he may have been thinking specifically in terms of telecommunications as for applicability doesn't stop his work from being generally applicable.
Absolutely. What's worse is that as it is reasonable to expect anyone clever enough to do so to also be clever enough to know why it's wrong, the very act raises serious questions about such a person's motives. Like the traditional freshman's trick algebra equation which proves that two equals one, or some such thing (impressing only those unable to spot the division by zero), Gitt disguises a trivial bit of sleight-of-hand with a plethora of irrelevance, counting on the eagerness of his intended audience to lead them quickly past it, and directly to his absurd conclusion. Then they all have cookies and punch.
I'm not talking about Gitt I'm talking about bioinformaticians who measure shannon entropy in genomes (Chen et al, 2005, Schneider 2000) or use Jensen-Shannon divergence as a metric for identifying genomic features such as CpG islands (Luque-Escamilla, et al., 2005).
If people are able to successfuly analyse the genome in terms of shannon information why do you feeel it is inapplicable? The transmission of genetic information from one generation to the next seems ideally suited to Shannon's problem of transmitting a signal over a noisy channel.
TTFN,
WK

This message is a reply to:
 Message 11 by Cal, posted 07-10-2006 11:28 AM Cal has replied

Replies to this message:
 Message 13 by Cal, posted 07-10-2006 1:44 PM Wounded King has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 16 of 24 (330519)
07-10-2006 4:24 PM
Reply to: Message 15 by Cal
07-10-2006 3:41 PM


For now, I'll offer this hint: I'm suggesting that DNA transcription is, ultimately, as deterministic a process as is a rock rolling down a hill.
I'm not sure it is transcription that is the relevant point when we are talking about the origin of the information within DNA, if there is any.
TTFN,
WK

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Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 20 of 24 (330704)
07-11-2006 4:36 AM
Reply to: Message 19 by Percy
07-11-2006 3:28 AM


Cal writes:
I stand by my claim that Shannon -- by the very act of explicitly excluding semantics from his model -- implicitly acknowledges the existence of some entity or entities with the capacity to find "meaning" (hopeless to define anyway) in symbols.
But that isn't what you claimed, you claimed that Shannon made ...
Cal writes:
... the tacit assumption that the message originated with an intelligent source
which is quite distinct from acknowledging that entities exist which can ascribe meaning to symbols. After all the reciever alone can ascribe meaning to the symbols they receive, and I might suggest that is what is happening in this case. We can find shannon information in DNA but the meaning we attach to it is our own interpretation and understanding of its physico-chemical function. And if we remove the neccessity for intelligence at the source then natural selection is a perfectly valid mechanism for 'selecting' a specific message from all the possible messages.
TTFN,
WK
Edited by Wounded King, : No reason given.

This message is a reply to:
 Message 19 by Percy, posted 07-11-2006 3:28 AM Percy has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 21 of 24 (330705)
07-11-2006 4:40 AM
Reply to: Message 18 by Cal
07-11-2006 1:04 AM


Agreed. Haste is my excuse. "Transcription and translation" would have been better.
Again I would disagree. Transcription and translation are the appropriate stages if we are looking at the transmission of information from the genome being used to 'inform' the synthesis of proteins but not if we are interested in the origin of the information in the genome itself. For that we surely have to look at mutation and natural selection.
TTFN,
WK

This message is a reply to:
 Message 18 by Cal, posted 07-11-2006 1:04 AM Cal has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 23 of 24 (330707)
07-11-2006 5:07 AM
Reply to: Message 22 by Percy
07-11-2006 4:59 AM


Oops, sorry Percy.
TTFN,
WK
Edited by Wounded King, : No reason given.

This message is a reply to:
 Message 22 by Percy, posted 07-11-2006 4:59 AM Percy has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


Message 24 of 24 (531844)
10-20-2009 7:48 AM


*Bump*
Just to bring this up again since the topic has arisen in Ned's thread.
TTFN,
WK

  
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