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Author Topic:   What is the mechanism that prevents microevolution to become macroevolution?
Faith 
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Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 226 of 301 (347272)
09-07-2006 11:43 AM
Reply to: Message 220 by crashfrog
09-07-2006 10:09 AM


Re: Noticing a mutation.
But the fact that all these people have it apparently from a common ancestor certainly suggests it's passed on just as any allele is, so I don't see any reason to believe it's a mutation.
Mutations are passed on like any allele, because mutations form new alleles.
Yes, it COULD be a mutation, but you are declaring that it IS a mutation though the evidence does not make that inevitable.
How do you know the ancestor didn't inherit it in the usual way?
Because only his direct decendants have it (and not all of them). His indirect decendants - those people who are decended from his parents or grandparents but aren't decended from him - don't. Thus, we have ample reason to conclude he's the origin of the allele (pedantically, I guess, the origin would be a mutation in the germline cell of one of his parents, either the sperm or the egg from which he was born.)
More new information. What further new information are you going to drop on us? All his parents' and grandparents' descendants have been studied, you're really claiming that? OK, another way that can be explained is that those who are available for study all got the recessive allele, all aa's without a single Aa in the lot; he had an Aa and that got passed down according to Mendel's formula, producing more aa's as well, because of the rarity of the dominant A, but also a few with this protective A. It could happen this way, and in the other line, the line of his siblings, the dominant form would just never show up again. As for his grandparents' line, and descendants of his aunts and uncles, there may be some descendants that haven't been identified. But in any case a single dominant could be all that was ever available to pass on in this family.
It could have been this way:
Grandparents Aa - aa
Parent: Aa -- Parent's siblings: aa aa aa aa aa aa (it's possible)
Parents together are Aa - aa and so on.
The A is then passed on ONLY in this line, and only to some of the descendants. In other words the descendants don't *prove* mutation any way you look at it.
It's basic inheritance. He's the top of the pyramid, thus, it began with him.
Basic inheritance works just as well the way I laid it out above. He's the top of the pyramid for his own line of descendants, but he could have been the only one of his siblings to get the dominant A allele, while his siblings all got the recessive other form of the gene. That could have been the case a generation previous too, that only his parent got the A allele but no aunts or uncles got it. Of course the more siblings in each generation the more likely another of them got it too, but you haven't said how many there were. And again, likelihood is not inevitability.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 220 by crashfrog, posted 09-07-2006 10:09 AM crashfrog has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 227 of 301 (347276)
09-07-2006 12:09 PM
Reply to: Message 224 by NosyNed
09-07-2006 11:28 AM


Re: Is it a mutation?
So you're saying that billions of individuals have LOST a beneficial allele but the decendents of one person somehow kept it from previously?
SOME of the descendants kept it. Yes I'm saying that it could certainly have happened that way, that billions could have lost it. The inheritance scenario is quite reasonable. It only becomes of value past the reproductive age, since hypercholesterolemia normally catches up to us later on, so there'd be no selection factors working for it.
This seems to me to fit the pattern of mutations doing us little good. That is, the known odds are that a mutation is either of no (recognized) function or it's deleterious.
Edited by Faith, : No reason given.

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 Message 224 by NosyNed, posted 09-07-2006 11:28 AM NosyNed has not replied

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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 234 of 301 (347323)
09-07-2006 5:18 PM
Reply to: Message 232 by crashfrog
09-07-2006 3:52 PM


Re: increasing frequency
So the only relevant probability is whether it's more probable that one person gains one mutation and passes it along, or that six billion people all coincidentally gain the exact same mutation and pass it along to everybody but 33 people.
Crash, that's not the idea. The idea is that back say a few hundred years or few millennia, the good allele got mutated to the nonbeneficial amino acid. It's an easy mutation to occur it appears, affecting only that one amino acid, so it could occur now and then in different individuals. This way the nonbeneficial mutation would gradually work its way into the population more and more with each generation. In each generation there would still be a lot of people who had the good kind of allele too of course, but if the bad mutation continues to occur from time to time then more and more people will have it. By modern times most people have it. By very modern times only a few families here and there still have the good allele to pass on as the Italian family did. It could also be that it still survives in concentrated numbers in some parts of the world where it hasn't yet been identified.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 232 by crashfrog, posted 09-07-2006 3:52 PM crashfrog has replied

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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 235 of 301 (347329)
09-07-2006 5:36 PM
Reply to: Message 229 by crashfrog
09-07-2006 1:28 PM


Re: Noticing a mutation.
OK, another way that can be explained is that those who are available for study all got the recessive allele, all aa's without a single Aa in the lot; he had an Aa and that got passed down according to Mendel's formula, producing more aa's as well, because of the rarity of the dominant A, but also a few with this protective A.
My, what a coincidence, that out of 6 billion people, the only ones that could be found to possess this dominant allele, which has profound and obvious effects on anybody with dietary risk factors, the only people who could be found all happen to be the direct decendants of one man who lived in the 18th century. The mind reels!
Faith. Finding people with this gene would be as simple as sending an email out to cardiologists and geriatricians asking them if they've ever encountered any individuals who, despite eating cholesterol-heavy foods and smoking, stubbornly refuses to develop any arteriosclerosis. The effects of this gene are profound and obvious. It should be very easy indeed to find other people with the very same gene, but they don't seem to exist. The only people on Earth known to have this gene are the 33 people decended from that one guy.
Does every person *on earth* have a cardiologist, Crash? Even in this first world country a lot of us would not be identified even for having or not having arteriosclerosis because we don't go to doctors much, so we're not going to be chosen as subjects for a DNA study. If we up and die of something else nobody will ever know if we had that allele or not. It seems that quite a few people are living up into their hundreds. One lady just died at 117 I think it was in South America. Was her DNA studied? Is every individual who lives a long life being studied?

This message is a reply to:
 Message 229 by crashfrog, posted 09-07-2006 1:28 PM crashfrog has replied

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 Message 238 by crashfrog, posted 09-07-2006 6:44 PM Faith has replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 236 of 301 (347331)
09-07-2006 5:41 PM
Reply to: Message 233 by Equinox
09-07-2006 4:12 PM


Re: Noticing a mutation.
Oh, not that it’s important, but an Aa + aa mating has a 50/50 chance of producing an aa with each child. Thus the aa aa aa aa aa aafamily mentioned has a 1 in 2^6 or 1/48 = 2% chance of happening. Yes, it’s possible, in fact, it’s thousands of billions of billions of billions of billions of billions of billions (.....) of times more likely than getting all 33 in just that one town. But in reality, these kinds of numbers show how unlikely either thing is.
Well, nobody has told us how many siblings there were in the family that passed on the allele in question so I'm guessing. I guessed a large number because that was common a few centuries ago. {edit: But of course you're right about the 50% chance of passing on that dominant allele, I wasn't thinking. So maybe there weren't many siblings after all}, or maybe there were siblings who died young, because that also was common in those days. More information would clear this up easily, if it's available.
And it's also still possible that other descendants of the family of that 18th century individual are still living somewhere with the good allele.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 240 of 301 (347359)
09-07-2006 7:41 PM
Reply to: Message 237 by crashfrog
09-07-2006 6:40 PM


Re: increasing frequency
The idea is that back say a few hundred years or few millennia, the good allele got mutated to the nonbeneficial amino acid.
Selection, Faith. Why wouldn't those people be outcompeted by the people with the Apo-AIM, who live long enough to support several generations of children?
This is a pretty unusual idea of yours that the grandparents' merely living a long time contributes so much to the reproductive success of their grandchildren. Where, pray tell, does that show up in evolutionist thinking outside your own ruminations? Why is the fact that selection only affects the reproductive years hammered away at so aggressively if other completely circumstantial factors are so important?
You're proposing that a deterious allele overtakes a beneficial one. Why would I accept such a counterintuitive outcome absent any evidence?
Well,
1) it's not lethal, not before reproductive success anyway, which is aggressively and loudly proclaimed to be "all that evolution cares about;"
2) and besides that, many who have it probably have had a long life in spite of it;
3) On its first appearance, were DNA analysis available, it would probably have shown up as one of those "nonfunctioning" mutations;
4) it is an acknowledged fact that most mutations are either "nonfunctioning" or deleterious, so why WOULDN'T you accept that this scenario fits the known evidence?
By very modern times only a few families here and there still have the good allele to pass on as the Italian family did.
Here and where? Where else is it?
Africa? Indonesia? Tibet? Rural or remote areas in Eastern Europe and Russia or South America -- or the US for that matter?
{edit: And I'd guess that even all the relevant branches of that Italian family tree haven't been subjected to DNA analysis.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 241 of 301 (347367)
09-07-2006 7:51 PM
Reply to: Message 238 by crashfrog
09-07-2006 6:44 PM


Re: Noticing a mutation.
When a big fat smoker dies, and during his autopsy they see tar in his lungs, and his 300 lbs of fat, but they can't find any evidence of arterial plaque - which is pretty obvious in a chest exam - the coroner is going to notice.
Come on, Crash. Autopsies aren't done routinely when people die.

This message is a reply to:
 Message 238 by crashfrog, posted 09-07-2006 6:44 PM crashfrog has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 242 of 301 (347502)
09-08-2006 5:01 AM
Reply to: Message 233 by Equinox
09-07-2006 4:12 PM


Re: Noticing a mutation.
OK, let’s look over the evidence (and please correct me if I miss important evidence or list some evidence incorrectly.)
1. The allele in question has only been found in 33 people in the world, despite a lot of scientific attention.
As I've said, it COULD be a mutation, but this simply has not been unequivocally proved. What's "a lot of scientific attention?" Since this is a very rare allele you have to be awfully thorough and even then how could you know you didn't just overlook it?
2. All 33 are direct descendants of a person who lived in the 18th century (call him Apo).
Yes. And how many of his descendants who don't have this allele are known? My own grandfather has at least 100 living descendants now. The 18th century is 100 years before his time, so the number of descendants could be a LOT larger than 33.
What do you know about Apo's descendants, their parents, their grandparents, their greatgrandparents. There are many branches of a family tree after 250 years or so. How do you know you didn't miss some who had the allele in Apo's sibling's lines?
3. The allele is different from an allele generally present in the human population by a single amino acid change.
Yes, an easy target for a mutation; but that means that the good allele is just as easy a target as the bad allele, which is why it could very well have been the other way around and the bad allele is a mutation that happened WAY back there in the human race, from which only a few lines of the good allele escaped.
4. Both hetero and homozygous individuals appear to be healthy, and no disadvantage to the allele can be found.
OK I'll have to read the article carefully. Is it known for sure that there are some who are homozygous for this trait?
5. Mendelian genetics and general probability apply.
I would hope so.
6. The allele is dominant.
So I've heard.
Now, which explains these better?
Test #1 - why are all 33 descended from Apo, and none found in, say, Chicago?
I'm not sure you haven't overlooked some in Chicago. Maybe in the last generation. Or in Iceland, or in Tierra del Fuego. Or even in Italy for that matter. How can you be absolutely sure?
If it was a mutation in Apo, then no one but his descendants should have it. That checks.
Yes.
If it was present in Adam (required by Faith), then somehow, despite being harmless, it must have been selected against to go from a frequency of at least 0.25 %, to a present day frequency of 33 in 6E9.
More likely killed by a mutation, or mutations in several individuals over time. Since there is nothing about it to select for it or against it, I would suppose it could have been lost to the majority of human posterity through a severe population reduction at some point, that severely reduced its frequency simply at random.
The odds of a human having it are approximated by 33/6E9, and so the odds of all of them being in the same town of 1000 people is
(the odds of a person being in that town vs the rest of the world)^(number of people with the allele)= (1000/6E9)^33
= 2E-224 = 0.000(200 zeros)2
Now that’s unlikely.
But that's silly. Obviously "Apo" got that allele, and passed it on to his descendants in that town. Nothing unlikely about that. The only question under consideration is how Apo got it and why other relatives apparently don't have it, if a reasonable number of them have actually been tested, which is a question.
OK, next test of the explanations (#2). If it were a mutation, it would HAVE TO BE clearly and simply related to present genes.
If it were an existing allele, it could be very different. In fact, it should be very different, since the odds of that long a nucleotide matching perfectly are very low. It’s as if you picked two pages from different parts of an encyclopedia, and the middle paragraph was exactly word for word identical, except for one word, which was changed from, say, “herd” to “hard”.
Clearly the mutation hypothesis is much more likely for this point, since it predicts the similarity, while the Adam hypothesis must explain away this otherwise very unlikely word for word matchup. (unless we want to postulate a God that specifically tries to trick people so he can send them to hell and watch them burn).
If we had the nucleotide sequences, I could calculate the odds they would match up so perfectly, assuming no relation.
Sorry, you lost me in all this. I thought we were talking about a very short segment, a mere amino acid, which is why a mutation was considered to be such a likely explanation. I don't grasp what it is you are talking about having to match so perfectly.
Test number 3. Does this gene increase or decrease over time?
Humans have been eating artery-clogging meat for a long, long time. Even if reproduction happens prior to death, a longer post-reproduction life is selected for because one can help raise the kids and grandkids.
I really don't grasp this reasoning. Are there studies that prove that the long lives of grandparents contribute to reproductive success, which is "all evolution cares about" as I've been told SO many times, as if it were news. Parents makes sense, but then arteriosclerosis doesn't usually get to us until we're about grandparent age.
So the mutation explanation says that the allele has been selected for the few generations since it has arisen, and that coupled with population growth explains how we went from 1 to 33.
All it means is that it got passed down in the proportions that accord with Mendel's formula in a normally healthy reproducing family line. No selection is implied, it just got passed along in the normal course of things.
I’ve explained before why we know that it was just 1 back at Apo- the numbers otherwise are extremely unlikely. So the mutation explanation explains the data.
It could, but it just doesn't seem to me that you've covered enough territory. Just wait until a few years down the road the same allele is discovered in a family line in Turkey and it can be traced back to the 13th century or something like that.
The adam explanation somehow must have this gene being strongly selected against to go from at least a 0.25% frequency, to near zero (1 in 700000000 in 1750 or so), then for some reason must have the whole process reverse, where now it increases in frequency. I haven’t heard any explanation of this back and forth gene frequency from the adam explanation.
Well I gave a scenario above about how mutations could have zapped it here and there though it survived in some populations in very low frequency. There is nothing about it to select for or against that I can see, and again, I don't get the longevity-value argument since it seems to contradict the standard evolutionist formula of reproductive success. I'd simply expect that it was more frequent in earlier centuries and just got mutated out, or squeezed out by population decreases or some such. It's not as likely as your explanation, true. But again, wait until you discover someone out of that Apo family line with the same allele. In Italy.
In fact, if things continue to degenerate after the fall, then the frequency of this good gene should only have gone down since Apo, so it should only have a couple people at most, or not exist at all.
Nobody has argued that this is a uniform process. I would expect that there would still be people of extraordinary good health living here and there. If you want the spiritual explanation, it's all a matter of sin. Read the Book of Proverbs. Good health and long life are a matter of living according to God's Law. I believe the Tao gives the same advice in different words.
I’m sure more comparisons can be made, and we can discuss those as well. Based on 1, 2 and 3 above, it really doesn’t look like “two explanations that work equally well”.
Well, this isn't a crucial issue to me. I don't care if it's a mutation. I just seriously doubt that it is and really irrefutable evidence for it has not yet been given.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 233 by Equinox, posted 09-07-2006 4:12 PM Equinox has replied

Replies to this message:
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 Message 247 by Equinox, posted 09-08-2006 4:24 PM Faith has replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 246 of 301 (347573)
09-08-2006 2:29 PM
Reply to: Message 243 by crashfrog
09-08-2006 1:41 PM


Re: DNA tests
Any time you've heard about someone living to advanced age, on the news, somebody's collecting a blood sample for use in research on the genetic properties of aging.
Like that guy who lived to be 127 or whatever eating nothing but eggs and sausage. Read it on Pharyngula the other day.
I couldn't find the story. I guess he didn't have the allele in question though he survived all that fat so long.

This message is a reply to:
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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 249 of 301 (347736)
09-09-2006 3:04 AM
Reply to: Message 247 by Equinox
09-08-2006 4:24 PM


Re: Noticing a mutation.
Nobody has argued that this is a uniform process. I would expect that there would still be people of extraordinary good health living here and there. If you want the spiritual explanation, it's all a matter of sin. Read the Book of Proverbs. Good health and long life are a matter of living according to God's Law.
OK, now the degeneration isn't uniform, but is rather a function of how Christian someone is?
Has nothing to do with being Christian. Has to do with obeying God's laws, which are taught by almost all the sages of all cultures in history. In the past. Nobody seems to have much of that kind of wisdom any more. The Biblical Book of Proverbs is a collection of wisdom sayings from many cultures. Nothing particularly Jewish about it OR Christian. And obeying the law is not Christianity. Christianity is knowing you are in trouble because you haven't obeyed the law and need a savior.
Or how nice they are? It sounds awfully larmarkian at best to claim that someone can change the genes of themselves or their kids by reading the Bible. If anyone gave that even a shred of credibility, then wouldn't preachers be claiming that as a way to increase their flocks?
Preachers preach the need of a savior. Living by the laws of the universe is a wise thing for anyone to do but it won't save you, merely make life easier on this planet, and it's not THE Christian message, as I say above. But read the Book of Proverbs. Many of them are cast in terms of cause and effect -- health and longevity from obedience. As I also said the Tao teaches as I recall.
Nobody has argued that this is a uniform process. ...... I don't care if it's a mutation.
OK, I think both of these are significant changes in view that we need to remember. From now on the degeneration after the fall is not like the slowing down of an unplugged fan, but is rather something that goes up and down depending on your religion.
More like the inevitable degenerative trend can be put off longer by obedience by individuals. Eveybody is going to die. Nobody will ever be obedient enough to avoid death. That's why we need a savior. But life on this planet can be improved by living within the laws that govern the universe, which, again, as I said, have been recognized by many sages of many cultures.
If you are a good Christian, your genes are magically fixed or perhaps just preserved better.
If I get anything across in this post at all, I'd like to get across that it has nothing whatever to do with being a Christian.
Muslim mutations happen all the time, but not as fast as those rapidly mutating Satanists!
Muslims may live by God's laws same as anyone else. I don't know about Satanists. I think they are rather committed to disobeying the moral laws of the universe, aren't they?
The genetic degeneration can go up or down depending on how it fits the creationists needs at the time. I know quite a few Christians who would be offended at seeing their religions used like that.
Good thing I'm not using it like that. Just being misrepresented by a straw man position.
And it was just an aside too. Oh well.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 255 of 301 (347879)
09-09-2006 11:16 PM
Reply to: Message 254 by RAZD
09-09-2006 8:37 PM


Re: are bottlenecks tied to speciation?
Thought I better get to this before the thread is closed for the 300 limit.
faith writes:
Well, I'm trying to avoid being all that strict, I'm trying to argue a TREND here, a trend TOWARD speciation that involves ...
Only looking at the data that fits the trend you want to find? Isn't that begging the question? No, you need to look at all the evidence and if the trend is clear you have something, if it is a football shaped scatter of points you have an indication of a trend but it is obscured by other factors and it could be totally unrelated.
You just aren't following, RAZD. ALL the data is included in my point about the trend, none is left out.
1) Most of the population-altering processes don't change the number of alleles, merely change their proportions in relation to each other. This includes population splits where both populations are large enough to contain all the allelic possibilities.
2) Some reduce the number of alleles, actually lose alleles from one population to the other, as in geographic isolation when the population is numerically small, and in bottlenecks, or may lose them altogether in drastic natural selection when much of a population dies.
3) The only process (except for mutation) that adds alleles is immigration or hybridization and this adds nothing new, it merely reintroduces alleles that were formerly separated. And if such a population is then subjected to any of the reducing processes it too can lose alleles ...
... and this is how I arrive at the clear overall trend of reduction of alleles over time. It is either simply reshuffling or it is reduction, genetic diversity is not increased by any of the above, only slowly reduced over time.
All the data is accounted for.
And that leaves mutation as THE ONLY process that MIGHT actually add new information. Which is what this thread has been focused on for the last few pages and will continue in the rest of this post.
The trend otherwise is clear. Please get the point. Nothing is left out of the reckoning.
==========
RAZD writes:
You can measure the frequency of alleles in a population before speciation and again several generations afterwards, after a series of mutations have occurred, and you get new alleles showing up, ones that were not in the original population: where do they come from? Mutations.
Please supply evidence of this. You are talking data, let's see the data. It has been asserted many times. Show me these brand new alleles in this completely isolated population that has no gene flow with other populations of the same species. Numbers please. And remember, I expect some mutations. I want to see numbers that are going to offset the inexorable reducing factors I've been naming all along.
Faith writes:
Well, but the whole point of the bottleneck (and founder effect) example is that it is not at all likely that you would get anything like the same distribution as was in the original population, because the new population is so much smaller.
We are not talking about situations where one end or the other of a distribution of alleles was selected by a survival event, but one where the survival was completely random and not based on any genetic advantage or disadvantage.
And the probability is that the individuals will be randomly selected in proportion to their existing distribution of alleles, so the 'bottleneck' population will have the same distribution.
You aren't really thinking about the situation of a sharply reduced population. Yes, for some genes there will be a similar distribution, but some genes have many alleles -- the more extreme the bottleneck the less the likelihood of getting all of them in the new population. When there is a severe bottleneck it's very possible that some alleles are just... gone, no longer part of the new population.
Of course human beings have never "speciated" so you can always recombine our alleles, but just for an example, pick a cosmopolitan city and randomly choose 10 individuals to isolate completely from everyone else to start a new population. You won't even get all three of the alleles for blood type that way. Check the maps at this site. Pick 100 individuals. What will the frequencies be then? If you pick your individuals from the Americas you probably won't get any B alleles at all; in South America you most likely won't get any A's.
RAZD writes:
Think of how public polls are conducted, and consider each question on a poll to be a gene and each possible answer is an allele variation.
Pollsters claim (based on the mathematics of population distributions) to be able to sample a thousand people and represent the opinions of ~300 million (american) people with something like a 5% error, right?
http://www.ropercenter.uconn.edu/pom/polling101.html
Opinions aren't like alleles. Bottlenecks don't "sample" a population. They catch what happens to be in a particular place at a particular time. Sure, if you calculate where you are going to come up with a good mix of As, Bs and Os you can do it. But that's not how bottlenecks happen.
some speciations cause bottlenecks in daughter populations
some speciations don't cause bottlenecks in daughter populations
some bottlenecks cause speciation
some bottlenecks don't cause speciation
Conclusion: bottlenecks and speciation are not necessarily related events.
I never said they were. Haven't I already answered this? I've said of course bottlenecks don't NECESSARILY eliminate alleles -- it depends on how large the bottlenecked population is (and even eliminating alleles may not constitute speciation). Counting ALL the alleles for ALL the genes in a population, in a severe bottleneck of some members of that population you are just about certain to eliminate some alleles. Some genes have more than three alleles -- depending on how small the bottlenecked population is, you could lose most of them.
(But again, certainly a bottleneck is not going to increase alleles.)
CONCLUSION: there is no relation whereby a bottleneck OR a speciation event - alone - can predict whether the other also occurs.
I never said there was, RAZD. Please quote where you think I said that. I remember saying clearly that of COURSE bottlenecks don't ALWAYS cause speciation -- or even always eliminate alleles.
I already answered you sufficiently in the previous post.
Again, please supply that DATA you keep talking about for increase in alleles in a completely isolated inbreeding population, at a rate that makes up the previously losses brought about by the speciation event -- it would be nice if the rest of this thread focused on this data.
Thank you.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
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This message is a reply to:
 Message 254 by RAZD, posted 09-09-2006 8:37 PM RAZD has replied

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 Message 277 by RAZD, posted 09-10-2006 8:59 PM Faith has replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 258 of 301 (347882)
09-09-2006 11:39 PM
Reply to: Message 247 by Equinox
09-08-2006 4:24 PM


Re: Noticing a mutation.
Do you hear how silly that sounds? It will be selected for, since heart disease does kill parents (a friend of mine died of heart disease at 39), plus, as we've said, grandparents are relevant, though less relevant than parents. And yes that is in the literature, it's discussed and proven often. The gene will be selected for, and increase, and so killing it off will be like trying to put out a wildfire on a windy day. Plus, you still have to explain why mutations that kill it are so much more likely than ones that make it.
Just the usual statistic that says that most mutations are not beneficial. Most do nothing recognizable, many do something lethal or produce diseases.
I know quite a few Christians who would be offended at seeing their religions used like that.
So? Since when is a feeling of offense the standard for truth?
Also, Faith no longer apparently cares if this clearly beneficial allele is a mutation.
Because it proves nothing that it happens once in a while. What must happen in order to offset the trend of allele loss or reduction of genetic diversity is LOTS of beneficial mutations. (This isn't relevant to humans since humans have never speciated according to the ToE formula -- that is, we don't have human groups who can't interbreed. The only point here is that beneficial mutations in humans should demonstrate that the rate is insufficient in any case).
I'll take your word for it at this point that this Italian thing is a mutation -- until I read more and get another angle on it or something.

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 Message 259 by DrJones*, posted 09-10-2006 12:18 AM Faith has not replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 267 of 301 (347960)
09-10-2006 4:12 PM
Reply to: Message 260 by TheNewGuy03
09-10-2006 4:45 AM


What is speciation etc.
Also, do you mind explaining "common ancestry" and "speciation" to me? I would like to know what you think.
Hi New Guy, I'm one of the Biblical Creationists here and will give you my angle on these terms.
Common ancestry in the most ordinary sense refers to any ancestor you have in common with other people, someone you all can trace your genealogy back to, such as a grandparent or great-great-great grandparent you all have in common.
Common ancestry to evolutionists means all living things can be traced back through many other forms of life to some beginning, say in the primordial ooze as a one-celled creature; and it is often used to refer to some supposed pre-ape/pre-human creature who is said to be the common ancestor of all the apes and all us human beings together.
From a Biblical point of view all human beings have Adam as our common ancestor; Noah too.
As for speciation, there was a time when creationists wouldn't own the term because it seemed to have been so completely taken over by the evolutionists it was useless to us. Gradually it's been accepted to define what we always have recognized as the way you can breed plants and animals to develop different forms of them. Evolutionists define speciation as the point at which these new breeds lose their ability to interbreed with the former population of which they were a part. To creationists this is an artificial distinction, since the ability to interbreed may be lost just because the genetics change too much, although the creature is not a new species, simply a new variation or breed.
So I freely use the term speciation to describe this ordinary process of variation. It occurs in nature and it occurs most dramatically when you aim to get a new breed of, say, dogs and cats.
On this thread I've been arguing that speciation occurs all the time, but that if you examine what brings it about, it ultimately involves the loss of genetic information -- that is, you get a new breed of dog by eliminating the genetic information that produces the characteristics you don't want in your new breed. The same thing happens in nature when a small population of an animal goes off on its own.
The "races" of human beings developed when people split the same way, small groups going off on their own and no longer mixing with the previous groups. They would then mix together only the alleles they had among them, which would eventually develop their own distinctive characteristics.
About skin color, the usual idea that it was an adaptation to the amount of sun in an environment implies that a lot of people had to die for the adaptation to develop, the ones who didn't have that adaptation. I'm not sure that explains it, but if it doesn't that leaves something Lamarckian, along the lines of genes changing in response to the environment.
Hope this is clear.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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 Message 260 by TheNewGuy03, posted 09-10-2006 4:45 AM TheNewGuy03 has not replied

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 Message 268 by Wounded King, posted 09-10-2006 4:23 PM Faith has replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 269 of 301 (347968)
09-10-2006 5:06 PM
Reply to: Message 268 by Wounded King
09-10-2006 4:23 PM


Re: What is speciation etc.
So essentially you use the word speciation in a way that makes it completely meaningless to anyone else?
I believe I use it to describe exactly what you use it to describe, only I disagree with you that it implies anything beyond the usual variation in a kind. As far as the genetics and other facts go, I use it the same way you do. I try to be careful to make distinctions when it seems necessary to set off the different interpretations.
{edit: I see I wasn't that careful in my post to New Guy, though, so maybe you have a legitimate complaint there. All the changes that are in the direction of speciation as evos describe it I guess I sometimes call speciation, though for the sake of clarity I suppose I should always make distinctions along the way.
This simply reflects the arbitrariness of the word to my mind, as evos use it, it seems to me. Inability to interbreed is an artificial standard from a creationist point of view, especially when you consider that by the time "speciation" by that definition has been arrived at, the genetic diversity is so decreased any further variation is just about impossible.
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This message is a reply to:
 Message 268 by Wounded King, posted 09-10-2006 4:23 PM Wounded King has replied

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 Message 276 by Wounded King, posted 09-10-2006 6:33 PM Faith has not replied

Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 270 of 301 (347970)
09-10-2006 5:22 PM


Data please for prodigious beneficial mutations
Seems to me I've made my case that all the processes of population genetics, with the exception of mutation, that lead to a change in allele frequencies in populations, either merely shuffle alleles or eliminate alleles, reducing genetic diversity, and that over time elimination of alleles is the slowly accumulating trend in changing populations -- faster if drastic events like bottleneck occur; and that mutation is the only thing that could possibly add alleles and increase genetic diversity in populations.
That being the case, I'd really love to see the DATA that so many refer to, that support the oft-repeated claim that mutation occurs frequently enough and beneficially enough to offset this inexorable trend to genetic depletion. Data, evidence. LOTS of GOOD mutations.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

Replies to this message:
 Message 271 by PaulK, posted 09-10-2006 5:44 PM Faith has replied

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