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Author Topic:   Abiogenesis
Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 266 of 305 (397171)
04-24-2007 8:03 PM
Reply to: Message 262 by AZPaul3
04-24-2007 6:39 PM


Eating the evidence
AZPaul3 wrote:
Do you really think that if some short-chain chemical replicator came into being in your back yard this afternoon you would know it? Would you really expect it to survive for the following few months without being some bugs dinner?
Then, by your reasoning, abiogensis could never happen because life would simply eat itself to death. (After bug A eats bug B it starves to death, and the whole process has to start over.)
”HM

This message is a reply to:
 Message 262 by AZPaul3, posted 04-24-2007 6:39 PM AZPaul3 has not replied

Replies to this message:
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Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 267 of 305 (397173)
04-24-2007 8:08 PM
Reply to: Message 265 by jar
04-24-2007 7:57 PM


Re: Why?
jar wrote:
Why would you expect that we would know everything important about it by now?
Why would you expect me to have my expections approved by you?
”Hm

This message is a reply to:
 Message 265 by jar, posted 04-24-2007 7:57 PM jar has replied

Replies to this message:
 Message 268 by jar, posted 04-24-2007 8:16 PM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 270 of 305 (397279)
04-25-2007 11:02 AM
Reply to: Message 268 by jar
04-24-2007 8:16 PM


Re: Why?
jar wrote:
Why would you expect that we would know everything important about it by now?
Because chemists are so dang sure it was only a chemical thing. Because chemists claim abiogenesis as their own thing (see Ringo's post in Message 246:
Why do there have to be special "abiogenic principles"? What's wrong with the principles of chemistry?
jar, don't bother me anymore with this question. I can have any old expectation I like without having to get your approval for it. Maybe you and Ringo and other molecular moles here would like to explain why the principles of chemistry are ALL there is to know about abiogenesis. With claims like that you'd think they'd have it in spades by now. (Where can send my $5 check to purchase one of those nifty laptop abiogenesis kits?)
Bottom line: If you think abiogensis was only a chemical thing then the burden is on you to prove it. I can't prove that it wasn't, but I can prove that life itself is more than just a collection of chemicals. (Clue: think genes”pure, digital information.)
”HM

This message is a reply to:
 Message 268 by jar, posted 04-24-2007 8:16 PM jar has replied

Replies to this message:
 Message 271 by NosyNed, posted 04-25-2007 11:25 AM Fosdick has replied
 Message 273 by jar, posted 04-25-2007 12:47 PM Fosdick has replied
 Message 277 by AZPaul3, posted 04-25-2007 2:18 PM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 272 of 305 (397289)
04-25-2007 11:49 AM
Reply to: Message 271 by NosyNed
04-25-2007 11:25 AM


Re: Proving more than chemistry
Nosy wrote:
Genes are after all just chemicals.
Are they? Rocks are all just chemicals. Dirt is all just chemicals. Planets are all just chemicals. The whole universe is all just chemicals. Why shouldn't life be all just chemicals? Chemists arrogantly like to ask those questions.
But life is more than just a bunch of chemicals. Because nowhere in this universe, so far as we, nothing but life that depends upon a digital code to facilitate its chemical survival and biological evolution. Take away it encoded messages and deciphering alphabet and whaddaya got? A lot amino acids floating around with nowhere to go and nothing to do...but, of course, they're all just a bunch of chemicals.
”HM
Edited by Hoot Mon, : No reason given.

This message is a reply to:
 Message 271 by NosyNed, posted 04-25-2007 11:25 AM NosyNed has replied

Replies to this message:
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Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 274 of 305 (397310)
04-25-2007 1:02 PM
Reply to: Message 273 by jar
04-25-2007 12:47 PM


Re: Still with the non-answers.
I see you are still simply trying to avoid answering the question while moving goal posts and making unsupported assertions.
Oh, and don't forget "palming the pea."
Of course. You can have any expectation you want. I just wondered if there was any reason for such an expectation, and based on your responses, the answer is that you have NO reason for holding such an expectation.
NO reason good enough for you, perhaps. Why do you cling to your chemicals when molecular biologists have already shown that there is more to life than molecular biology?
”HM

This message is a reply to:
 Message 273 by jar, posted 04-25-2007 12:47 PM jar has replied

Replies to this message:
 Message 275 by jar, posted 04-25-2007 1:09 PM Fosdick has not replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 284 of 305 (397395)
04-25-2007 7:57 PM
Reply to: Message 277 by AZPaul3
04-25-2007 2:18 PM


The chemical v. code test
AZPaul3 wrote:
Would you share this proof you have that life is more than just a collection of chemicals?
Sure, if you're into thought experimentation. Take two E. coli bacteria and put them in separate test tubes containing the same sterilized, healthy medium. Now, using your nanosurigical skills, take one bacterium and shuffle all of the nucleotides on its DNA, making sure you have all the very same nucleotides you started out with after the shuffling is complete. You won't change the chemical at all”it's still DNA with every one of its nucleotides present and accounted for (only in a different order). To the second bacterium you perform the same kind of nanosurgery, to neutralize surgical effects, but you will leave the order of nucleotides on its DNA alone. Make sure you put 'em all back in the right places, OK. Start the clock and let the experiment run for 24 hours. Return and examine your results.
I predict that one test tube will have lots of healthy microbes swimming around. And I predict one test tube will not have any at all. There is the proof you desire, because BOTH bacterial cells contained ALL the chemicals they allegedly require to get on with their bacterial affairs. But only one of them contained that pure, digital information we have come to know as genes. That bug did fine. But take those whispy codes away and whadaya get? A tiny lump of chemicals and nothing else.
Case closed.
”HM

This message is a reply to:
 Message 277 by AZPaul3, posted 04-25-2007 2:18 PM AZPaul3 has replied

Replies to this message:
 Message 288 by NosyNed, posted 04-25-2007 8:29 PM Fosdick has replied
 Message 289 by Coragyps, posted 04-25-2007 8:40 PM Fosdick has not replied
 Message 294 by AZPaul3, posted 04-26-2007 11:27 AM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 285 of 305 (397396)
04-25-2007 7:59 PM
Reply to: Message 279 by Woodsy
04-25-2007 2:32 PM


Re: Pure, Digital, Information
Woodsy wondxers:
I wonder if Hoot Mon is trying to sneak souls in through the back door with this "more than chemistry" stuff.
Not souls. Codes.
”HM

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 Message 279 by Woodsy, posted 04-25-2007 2:32 PM Woodsy has not replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 286 of 305 (397397)
04-25-2007 8:01 PM
Reply to: Message 271 by NosyNed
04-25-2007 11:25 AM


Re: Proving more than chemistry
Nosy wrote:
Oh really? Prove it then. Genes are after all just chemicals.
Please see Message 284.
”HM

This message is a reply to:
 Message 271 by NosyNed, posted 04-25-2007 11:25 AM NosyNed has not replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 287 of 305 (397402)
04-25-2007 8:10 PM
Reply to: Message 280 by Modulous
04-25-2007 2:58 PM


Re: Rock spore eat my proto-life!
Mod writes:
Prebiotic chemicals don't have the opportunity to chemically self organize and develop hereditary traits - since those chemicals will be being used for other things by existing and prevalent life.
Well, if those prebiotic chemicals didn't do the biological trick, then what did?
”HM

This message is a reply to:
 Message 280 by Modulous, posted 04-25-2007 2:58 PM Modulous has replied

Replies to this message:
 Message 293 by Modulous, posted 04-26-2007 11:24 AM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 290 of 305 (397519)
04-26-2007 11:00 AM
Reply to: Message 288 by NosyNed
04-25-2007 8:29 PM


Re: The chemical v. code test
NoseyNed & Coragyps,
There are more than chemicals in DNA; there are digital messages, too. If you deny this fact then you have to go back to school and learn what you missed in freshman biology. How many chemical isomers can you think of that are configured as digital code? I can think of DNA and RNA...and you can add the rest. I'll be interested in seeing how long your lists are.
”HM

This message is a reply to:
 Message 288 by NosyNed, posted 04-25-2007 8:29 PM NosyNed has not replied

Replies to this message:
 Message 291 by kuresu, posted 04-26-2007 11:08 AM Fosdick has replied
 Message 292 by ringo, posted 04-26-2007 11:12 AM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 296 of 305 (397536)
04-26-2007 1:02 PM
Reply to: Message 291 by kuresu
04-26-2007 11:08 AM


Re: The chemical v. code test
kuresu wrote:
so when dealing with bits (you know, 1s and 0s), which are just electrical signals, there's more than electricity? Is that something "more" inherent and intrinsic, or extrinsic and not inherent?
How about the signal-to-noise ratio? What makes your system coherent? Why don't rocks do that? They're chemicals, too, aren't they? Do you have a chemical principle for such kinds of coherent self-organization to offer?
are you suggesting that information in DNA is not an inherent property? I argue here that information is an inherent, instrinsic property, not something that can be developed separately (which is what you are suggesting happened, if I understand you properly).
No, not separately. Intrinsically. I can agree that genetic information developed somehow along with the molecular development of RNA/DNA. Or maybe later, I don't know. But the fact that genes eventually appeared as encryptions on RNA/DNA is still interesting to me. Besides biological systems, no other marriage between codes and molecules ever occurred in nature. At least so far as we know. Why shouldn't I be curious about the role of digital code in biological organization? It seems like an awfully clever trick of nature.
Chemicals. Reductionism. Tinker Toys. Erector Sets. Who, or what, writes the instruction manuals for those mechanical wonders? Am I to assume that the molecules, working in cooperation with unknown natural forces, invented the code on their own to inform their protein molecules? I don't think Goddidit. I think it probably did it on its own. But I simply don't understand how. That's all.
”HM

This message is a reply to:
 Message 291 by kuresu, posted 04-26-2007 11:08 AM kuresu has replied

Replies to this message:
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Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 297 of 305 (397538)
04-26-2007 1:18 PM
Reply to: Message 293 by Modulous
04-26-2007 11:24 AM


Mod's Law
Mod wrote:
I didn't say prebiotic chemicals didn't do the biological trick. I said prebiotic chemicals can't do the biological trick in the present due to the existing biota.
If you are right, Mod, then you have discovered an important biological principle. I'll call it the "abiogenic truncation principle"”once abiogenesis is successfuly established it cannot happen again, because existing biotic will truncate its late appearance by having it for lunch.
If you know for certain that your principle is correct, then I'd suggest you apply for authorship immediately if not sooner. Hell, it's more than a principle! Let's call it "Mod's Law."
”HM

This message is a reply to:
 Message 293 by Modulous, posted 04-26-2007 11:24 AM Modulous has not replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 298 of 305 (397539)
04-26-2007 1:22 PM
Reply to: Message 292 by ringo
04-26-2007 11:12 AM


Re: The chemical v. code test
Ringo wrote:
Profound.
”HM

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Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 299 of 305 (397542)
04-26-2007 1:32 PM
Reply to: Message 294 by AZPaul3
04-26-2007 11:27 AM


Re: The chemical v. code test
AZPaul3 wrote:
The development of this code is the interesting part. Molecular combinations in random trial and error over a few hundred million years or something more directed? Any speculations on this you can share with us?
Wish I had a good one. Since I don't believe Goddidit, what are my options? Vitalism? Parallel universes? What ever it is that we don't yet know is HUGE.
”HM

This message is a reply to:
 Message 294 by AZPaul3, posted 04-26-2007 11:27 AM AZPaul3 has replied

Replies to this message:
 Message 300 by AZPaul3, posted 04-26-2007 1:44 PM Fosdick has replied

Fosdick 
Suspended Member (Idle past 5521 days)
Posts: 1793
From: Upper Slobovia
Joined: 12-11-2006


Message 302 of 305 (397560)
04-26-2007 3:01 PM
Reply to: Message 300 by AZPaul3
04-26-2007 1:44 PM


Re: The chemical v. code test
AZPaul3 wrote:
Do you reject molecular combinations in random trial and error over a few hundred million years?
Pure chance doesn't do it for me. Have you any probability models to determine what those odds were? I believe its was Hoyle and Wickramasinghe who calculated the probability of the first protein molecule to be on the order 1 in 10^120.
”HM

This message is a reply to:
 Message 300 by AZPaul3, posted 04-26-2007 1:44 PM AZPaul3 has replied

Replies to this message:
 Message 303 by Wounded King, posted 04-26-2007 3:29 PM Fosdick has not replied
 Message 304 by AZPaul3, posted 04-26-2007 3:33 PM Fosdick has not replied

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