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Author | Topic: Converting raw energy into biological energy | |||||||||||||||||||||||
Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
jar:
Looking at the chemical makeup of ATP, AMP and ADP I don't see anything particularly exotic or surprising. None of them are particularly complex molecules, and the conversions back and forth between the various molecules is pretty straightforward. If we look back at hyperthermophiles like Archea we even find that they use sulphur instead of oxygen as the electron acceptor during respiration and so would have thrived in earlier oxygen deprived, sulphur rich environments. The important point though is that in all cases what is seen is simply chemical reactions. That's all fine and good jar, but the energy source is not the issue (fermentation, photosynthesis or respiration as you brought up here). Hyperthermophiles like Archea be damned... you still need ATP. And even though ATP appears to be relatively simple, the way it is made isn't simple; a multitude of functions are involved ( http://www.emc.maricopa.edu/...farabee/BIOBK/BioBookATP.html ). molbiogirl and I discussed this here http://EvC Forum: How to make a ribozyme (using abiotic starting compounds) -->EvC Forum: How to make a ribozyme (using abiotic starting compounds) The exchange ended this way: Rob: The source of energy for these reactions is stuff like ATP and GTP. Molbiogirl: Nope. Today's organisms use three types of energy sources: fermentation, photosynthesis and respiration. None of these energy sources has been linked directly to the origin of life. A fourth energy source, ”thermosynthesis,’ free energy gain from thermal cycling, was proposed in a theoretical model for the emergence of the chemiosmotic machinery ... Rob: Pardon me, you are correct. However, my point was that those processes only convert raw energy into the form necessary for complex nucleotide synthesis. Molbiogril: Of course modern ATP synthase didn't exist back then. Nobody's claiming it did. Except you, I mean. Rob: What could I claim did exist back then, without moving into hypothetical wonderland? Are you suggesting something did exit that is not materially emperical? Whatever the answer, it appears miraculous (I'll spare you the quotes from evolutionists who agree on that point). Edited by Rob, : No reason given.
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
Are you willing to admit that it has happened in vitro? As in... artificial insemination? Talk about assuming the existence of the very thing your trying to explain. Not to mention guided by intelligent agents...
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
Don't start up with this crap again, Rob. ATP was formed the way Doddy outlined it in the first 12 posts of the ribozyme thread. What? Correct me if I am wrong... please... But wasn't Doddy specifically describing the theoretical making of these materials in a laboratory?
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
Can I take this as an admission on your part that all of these processes HAVE taken place in the lab? You mean taking already formed biological machines and helping the process along with advanced technology and intelligent doctors? You bet molbiogirl. Be my guest!
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogril:
Is it your position that ATP cannot be made in the lab without ATP synthase No... It is my position that ATP cannot be made in nature without ATP synthase; unless, there is a lab and an intelligent agent to guide the process. Edited by Rob, : No reason given. Edited by Rob, : No reason given.
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
The steps in yellow have been re created in the lab. What yellow?
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
We know what the conditions were 3 bya. We re-create them in the lab. So far, these steps toward RNA world have been completed: Limited polymerization RNA ligases RNA capping RNA phosphorylation RNA cleavage Peptide bond formation Amide bond formation And the same postulated conditions produced all of these results? Or did it take huge differences in environment to produce different stages?
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
jar:
So far all you have done is offer incredulity. I am asking questions. And you have no answers. That is why I ask them...
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
That was an interesting article jar. Unfortunately we do not live in plasma. In fact, I think that is what killed Spock.
What in the world does it have to do with ATP production by organic processes? You accuse me of palming the pea? Edited by Rob, : No reason given.
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
Yes. The same conditions resulted in the above. Ok... sources please...
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
jar:
In addition, plasma states happen to be pretty common. One example is lightning. Others are produced during meteor or comet strikes, also fairly common particularly during the early period of Earth's existence. Life in plasma eh? Who knows? Perhaps the Burning Bush wasn't such a far fetch after all...
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
Rob: Correct me if I am wrong... please... But wasn't Doddy specifically describing the theoretical making of these materials in a laboratory? molbiogirl: No. He was not. Doddy: http://EvC Forum: How to make a ribozyme (using abiotic starting compounds) -->EvC Forum: How to make a ribozyme (using abiotic starting compounds) First sentance... quote: Edited by Rob, : No reason given.
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
molbiogirl:
Unrau, P. J. & Bartel, D. P. RNA-catalysed nucleotide synthesis. Nature 395, 260-263 (1998). Johnston, W. K., Unrau, P. J., Lawrence, M. S., Glasner, M. E. & Bartel, D. P. RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension. Science 292, 1319-1325 (2001). Zhang, B. & Cech, T. R. Peptide bond formation by in vitro selected ribozymes. Nature 390, 96-100 (1997). von Kiedrowski, G. A self-replicating hexadeoxynucleotide. Angew. Chem. 25, 932-935 (1986). Gilbert, W. The RNA world. Nature 319, 618 (1986). Joyce, G. F. RNA evolution and the origins of life. Nature 338, 217-224 (1989). Ferris, J. P., Sanchez, R. A. & Orgel, L. E. Studies in prebiotic synthesis III. Synthesis of pyrimidines from cyanoacetylene and cyanate. J. Mol. Biol. 33, 693-704 (1968). Robertson, M. P. & Miller, S. L. An efficient prebiotic synthesis of cytosine and uracil. Nature 375, 772-774 (1995). That's nice... So I have to read all of these to verify that the evironmental conditions were the same for the re-construction of all of the steps you listed? Surely there is a link to the subject... Nevermind! I'll find it myself...
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
jar:
The point is you have been shown examples of converting raw energy into biological energy, that complex molecules can form naturally, that there are examples of naturally occurring inorganic molecules that combine, split, recombine, evolve, form new combinations, form helixes similar to DNA. I've been shown none of the above... what I have been shown is a bunch of theorizing and speculation.
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Rob  Suspended Member (Idle past 5870 days) Posts: 2297 Joined: |
jar:
So once again, other than your personal incredulity, what is the issue? There's something very wrong with this picture... I intend to show that molbiogirl's assertion that the same environmental conditions in the lab led to the reproduction of all of those different properties is false. That it would in fact, take completely different atmospheric conditions to produce subsequent changes in the prebiotic matter. And that her assertion assumes the survivability of said matter in the mean time. Be patient. Don't cover me with dirt quite yet... Edited by Rob, : No reason given. Edited by Rob, : No reason given.
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