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Author Topic:   TOE and the Reasons for Doubt
Dr Jack
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Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 37 of 530 (526558)
09-28-2009 11:24 AM
Reply to: Message 13 by Peg
09-28-2009 7:56 AM


What Sagan said
Here's the full quote from Sagan, Peg:
quote:
The fossil evidence could be consistent with the idea of a great designer; perhaps some species are destroyed when the designer becomes dissatisfied with them, and new experiments are attempted on an improved design. But this notion is a little disconcerting. Each plant and animal is exquisitely made. Should not a supremely competent designer have been able to make the intended variety from the start? The fossil record implies trial and error, an inability to anticipate the future, features inconsistent with an efficient designer (although not with a designer of more remote and indirect temperament).
Now, do you think that:
a) The section you quoted accurately reflects what Sagan was saying?
b) That what he actually said supports your position at all?

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 41 of 530 (526607)
09-28-2009 4:53 PM
Reply to: Message 23 by mike the wiz
09-28-2009 8:44 AM


Re: Some facts that you may not be aware of
I was theistic evolutionist for about a year, but then I learnt new things that gradually changed my mind.
What new things did you learn that changed your mind, Mike?

This message is a reply to:
 Message 23 by mike the wiz, posted 09-28-2009 8:44 AM mike the wiz has replied

Replies to this message:
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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 79 of 530 (526753)
09-29-2009 8:55 AM
Reply to: Message 68 by mike the wiz
09-29-2009 7:58 AM


Re: Some facts that you may not be aware of
For example, I could say that an ostrich is a transitional to a sparrow given enough time
I see this claim, or similar ones, from Creationists all the time; the idea that you could just line up modern species and form "transitionals" so it doesn't mean anything. It's just not true.
There is no living creature that resembles a transitional like Archaeopteryx, no living creature that forms a transitional like Tiktaalik, no Eohippus, no Australopithecus, the list goes on and on. You can't just say things are transitionals by looking at living creatures, the necessary creatures just aren't there. And even if you could, you'd still be missing any concept of order. The transitionals identified in the fossil record are not found arbitrarily, they're found in order according to multiple, independent dating techniques. In some cases (e.g. Tiktaalik) they were found were they were predicted to be by people looking there specifically because that's where they might find that particular transitional form.

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 87 of 530 (526769)
09-29-2009 9:31 AM
Reply to: Message 84 by Parasomnium
09-29-2009 9:28 AM


Re: Some facts that you may not be aware of
With some justification you could say that, for instance, penguins seem to be a transitional form between flying birds and a future species of animal that lives mainly underwater.
I'm not talking about transitionals to hypothetical future species; I'm talking about transitionals between existing species.

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 Message 84 by Parasomnium, posted 09-29-2009 9:28 AM Parasomnium has replied

Replies to this message:
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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 92 of 530 (526776)
09-29-2009 9:38 AM
Reply to: Message 91 by Parasomnium
09-29-2009 9:36 AM


Re: Some facts that you may not be aware of
In that case it's quite obvious that there are none. They are cousins after all.
I know that. But Mike made a claim very similar to one I've seen lots of other Creationists make that you could just line up existing species and call them "transitionals" and that's all the transitionals we have found are - scientists lining things up and saying they're transitional.
This is not so.

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 Message 91 by Parasomnium, posted 09-29-2009 9:36 AM Parasomnium has replied

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 143 of 530 (527906)
10-03-2009 9:39 AM
Reply to: Message 142 by Peg
10-03-2009 9:22 AM


Re: Some facts that Peg may not be aware of
Er... did you not understand the post?
Kaichos Man has posted on your side.

This message is a reply to:
 Message 142 by Peg, posted 10-03-2009 9:22 AM Peg has replied

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


(1)
Message 150 of 530 (527915)
10-03-2009 10:04 AM
Reply to: Message 140 by Kaichos Man
10-03-2009 9:11 AM


There is not a target mutation
So lucky, that it's now got the 5 correct mutations it needed to improve by 0.5% and reach that magic figure of 98.5% completion. Now natural selection can take it the rest of the way!
(emphasis mine)
It doesn't work this way. There aren't "correct mutations", evolution is not searching toward a single "correct" sequence of nucleotides. Because the assumptions behind your calculations are wrong, your results are meaningless.
Edited by Mr Jack, : tag fix

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 155 of 530 (527923)
10-03-2009 10:31 AM
Reply to: Message 154 by Kaichos Man
10-03-2009 10:25 AM


Re: There is not a target mutation
Evolution isn't searching for a single correct sequence- we are. Let's say the gene is for the antenna on a fruit fly. We know exactly what the sequence needs to be. The exercise is designed to see how that particular gene might have been created by random mutation and natural selection.
It needs to be for what? Are you talking about a mutation we've already discovered? Then your argument is even more broken. You can't treat the probabilities of an event that has already occured like that way; if you could no-one would ever win the lottery.

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 167 of 530 (527937)
10-03-2009 11:06 AM
Reply to: Message 162 by Kaichos Man
10-03-2009 10:47 AM


Re: There is not a target mutation
Hi Kaichos,
If you enclose the bit of a message you're quoting in quote tags, like this:
[qs]Quoting you[/qs]
then it'll come out like this:
Quoting you
And be much clearer for all
...
On to your actual post
No, I'm talking about a known gene which, according to you, must have evolved.
Yes, that's what I said. Your argument doesn't work for it, it would only work for a gene we hadn't found and were looking for. It's like this, see: I've just rolled 12 dice, and come out with the result 543456656141 !! Amazing, huh? That's a 1 in 2,176,782,336 chance! Isn't it astonishing that it happened?
Well, no, of course it isn't. Because while events may be astonishingly unlikely before they happen, after they've happened the probability of them having happened is 1.
This last statement only makes sense if you believe in evolution.
I hope you now realise I was talking about basic probability and not evolution.
Edited by Mr Jack, : While a probably may be probable, it isn't probability.

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 182 of 530 (528039)
10-04-2009 3:31 AM
Reply to: Message 177 by Kaichos Man
10-04-2009 12:27 AM


Re: Some facts that Peg may not be aware of
Let's put it another way. The probability of a fruitfly's wing not being arrived at is 41000-1/41000.
Which is really, really really close to 1 which is stone cold certainty.
I assure you that 41000 is a very long way from one.

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 Message 177 by Kaichos Man, posted 10-04-2009 12:27 AM Kaichos Man has replied

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 183 of 530 (528040)
10-04-2009 3:33 AM
Reply to: Message 176 by Kaichos Man
10-04-2009 12:14 AM


Re: There is not a target mutation
Their problem lies in convergence. The same organ appearing in vastly disparate species.
Could you elaborate on what exactly you are talking about here? We share organs (and all the other common features) with other species because we have a common ancestor with them. These organs don't uniquely spring forth anew, they are conserved from that ancestor. Or was that not what you meant?

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 184 of 530 (528042)
10-04-2009 3:54 AM
Reply to: Message 174 by Peg
10-03-2009 10:13 PM


Re: Some facts that Peg may not be aware of
anyway, regarding genetic research and its inability to prove ToE here is a research paper of Lonig
Well, I've read that paper which discusses how mutation breeding experiments behave. It discusses the unsurprising result that the number of novel mutations found is asymptotic with the number of experiments. This is a paper based on discussing a particular aspect of agricultural breeding; it is fantasy to think it has any impact on evolutionary issues.
Could you explain why you think it proves that genetic research is unable to prove ToE?
Edited by Mr Jack, : Improved clarity.

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 Message 174 by Peg, posted 10-03-2009 10:13 PM Peg has replied

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 Message 194 by Peg, posted 10-05-2009 4:16 AM Dr Jack has replied

  
Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 199 of 530 (528191)
10-05-2009 5:42 AM
Reply to: Message 194 by Peg
10-05-2009 4:16 AM


Mutation breeding, and the truth about histones
he goes on to explain that this is reason why almost all commercial breeding stations in the USA and Europe have deleted mutation breeding from their research programmes. Because they dont work! How can they be a basis for undirected evolution when even under laboratory conditions, mutations fail?
Do you know what a mutation breeding experiment is, Peg? They take individuals from a genetically homogeneous captively bred population and expose them to radiation to induce mutation and have a gander at what results. There are three things about this you should immediately recognise as being different from natural populations:
1. There is no accumulation of mutations
2. Mutation is induced by large radiation dosages
3. The initial population is homogeneous
That these experiments produce an asymptotic number of mutations should be entirely unsurprising to you - there are only so many nucleotides to mutate or places to break a DNA strand (a common cause of mutation in radiation experiments but almost completely irrelevant to evolution). And most breaks to a gene will have the same effect: no functional protein produced so large groups of these point mutations and breaks will produce the same mutation.
You'll notice as well that a large number of mutations produce no effect at all, either because they have struck some part of the genome that produces no meaningful change (i.e because it hit an inactive or duplicate gene) or because the mutation does not meaningful change the protein produced (either because it produced a synonym for the same amino acid, or because it altered a part of the protein not critical to function to a similar amino acid).
Which brings me on to accumulation of mutation, whereas in a mutation breeding experiment these neutral changes are useless, in evolution they can be quite important. An empirical example of this comes from Richard Lenski's experiments with E. coli where an early neutral mutation was key in allowing a later mutation that enabled citrate metabolism.
As a final point regarding mutation breeding, I refer your attention to a point you made:
He also says on page 50 that "If one multiplies the proportionate number of disadvantageous mutations by the factor of 10, the result would already be some 100,000 to 400,000 negative (or unavailing or neutral) mutants to 1 useful for breeding research"
Again, I draw your attention to the point raised in the last couple of pages of this thread that there is not target in evolution. The goals of agribusiness are much more narrow and more defined than the range of potentially beneficial mutations for a natural population.
(Oh, and as a matter of fact the main reason that mutation breeding is being dropped from agriculture is not that it doesn't work: it does, as any wheat field you've ever walked through attests but because considerably more powerful methods are now available)
On to your second point:
Now if you think about the sheer complexity of DNA, you cant possibly imagine that such a structure could come into existence without direction and intelligence.
Five histones are involved in DNA (histones are thought to be involved in governing the activity of genes). The chance of forming even the simplest of these histones is said to be one in 20/100
One in 20/100? That's 1 in 0.2, or 5 times certainty! Wow! I never knew they were so probable!
Snark aside, how is the "chance" of forming a histone remotely relavant to anything? Histones were not formed by chance, they evolved. Even the simplest histone forms found in Eukarya probably took a billion years to evolve, and the complex forms found in our nuclear DNA took longer still. The much simpler (but homologous) histones of Archaea doubtless took less time to emerge.
And bacteria, of course, manage just fine with not a single histone to their name as does the mitochondrial DNA found in every cell of your body. Histones are not needed for DNA function, and thus certainly not needed for life.

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 208 of 530 (528209)
10-05-2009 7:45 AM
Reply to: Message 206 by Peg
10-05-2009 7:35 AM


The tragedy of the Creationists
well researched and well written is what it is.
No, it's not, it's dishonest, misleading rubbish. You can find a critique here if you wish; it's pretty damning.
But that's rather an aside. To me, posts like yours are the real sadness of Creationism, it's not just that you're wrong it's the time and effort you and people like you are putting into reading the wrong sources. Rather than studying real science, and real biology, you're lapping up lies and misinformation. That's really sad.
There's a world of books on biology out there, catering to all levels of knowledge. If you put half the effort into studying them you do into absorbing this bullshit you'd have learnt so much about the world. Instead you're rattling around inside an echo chamber of misinformation.
I think that's tragic.

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Dr Jack
Member
Posts: 3514
From: Immigrant in the land of Deutsch
Joined: 07-14-2003
Member Rating: 8.3


Message 265 of 530 (528697)
10-06-2009 5:02 PM
Reply to: Message 260 by Drosophilla
10-06-2009 2:09 PM


Re: Doubts? Or out to destroy the TOE?
I suppose we use colloquialism so unthinkingly it is easy to see why readers half way across the globe get at cross-purposes. I hope you didn't think I meant that scientists 'graft' their work from efforts of others etc....I think we'll leave that to our Creationist friends to do....in case they think I am unduly mean here - grafting in the non-Yorkshire sense is precisely what the practice of quote-mining is all about - and we know who does those don't we?
It's not just Yorkshire, I was baffled as to why Coyote was objecting.
Heh: two peoples very much alike in everything, of course, but their language

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