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Author Topic:   Evolution Requires Reduction in Genetic Diversity
Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 260 of 1034 (692408)
03-02-2013 5:20 PM
Reply to: Message 256 by NoNukes
03-02-2013 4:20 PM


Re: Semi-summary
You don't get new breeds by reducing genetic diversity, reduced gentic diversity is a result of genetic isolation.
I disagree.
THANK YOU!!
New dog breeds are less diverse than the entire subspecies Canis lupus familiaris because breeders cull diverse offspring during breeding.
The culling contributes to the reduction of genetic diversity, certainly, but it isn't THE reason for it. The mere fact of inbreeding a small population produces reduced genetic diversity, and culling will contribute and further reduce the genetic diversity but you are getting the reduction in genetic diversity even without severe culling.
Any single breed would have to be less diverse than the sub species because the sub species includes the new breed plus every other dog that has ever walked the face of the earth.
Right. Which point I've made here more than once. Apparently Tangle can't read.
For example the set of human beings with blond hair, blue eyes, and height over 6 feet tall is less diverse than the species Homo sapiens.
Right. MUCH less.
My statements about the dog sub species were perfectly clear and correct. In a previous post I even named the sub species. I won't pillory Faith for not following my meaning despite the fact that I used the terminology correctly, but I'm certainly not going to accept any responsibility for her error.
Who erred is beside the point anyhow.
I'm willing to be the one who erred but it was a misreading and I am certainly aware that dogs are a subset of wolves and to pillory me for that as Percy is doing is grossly unfair and a distraction from the argument.
The inescapable conclusion is that dog breeding produces neither new species or nor new subspecies. It produces only inter-fertile offspring of the same sub species.
It depends on what is meant by the terms. A breed is at least analagous to a subspecies in nature. And most selection and isolation events in nature produce inter-fertile offspring as well, though they may be reproductively isolated by various natural barriers.
I'm not hanging anything on the inability to interbreed which is the artificial definition of Speciation, I'm ONLY arguing that producing new phenotypes that characterize a new population, which does happen in the wild as a result of reproductive isolation of small populations, is the same as what happens in domestic breeding as far as that goes. I think ring species demonstrate the principle I'm trying to describe here. They may be able to reproduce with the populations on either side of them but at the extremes they usually cannot interbreed. Even if they can that's not the crucial point. The point is only that the phenotypic differences among the different populations are most likely the product of simple migration and geographic isolation from each other, WHICH DECREASES GENETIC DIVERSITY FROM MOTHER POPULATION TO DAUGHTER POPULATION AROUND THE RING. IF this is how the ring develops, which I think it has to be, then the result should be decreasing genetic diversity from subpopulation to subpopulation through migration and reproductive isolation alone.
In other words, even after acknowledging her mistake and blaming me for it, Faith hasn't noticed that the argument is over. If in fact speciation is possible, something Faith has yet to dispute, dog breeding does not produce speciation.
Again you are missing the main point. SPECIATION IS NOT THE POINT, though certainly it may occur and by exactly the same processes I'm describing. But the POINT is the production of new varieties by reproductive isolation, and the varieties may continue to be able to interbreed, that's not the important part. As long as they maintain reproductive isolation for whatever reason they will maintain their particular phenotypic character. I don't care whether it leads to speciation or not, the point is that these processes that produce new varieties, breeds, "species" or phenotypes or subspecies or subsubspecies can only do so by reducing genetic diversity, and you do not get the production of new varieties, breeds, "species" or phenotypes in any other way.
No, this argument is not over at all. Since I don't think it's really been grasped by most of you, certainly by those who so loudly claim it has, it's not even really begun.

This message is a reply to:
 Message 256 by NoNukes, posted 03-02-2013 4:20 PM NoNukes has seen this message but not replied

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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 261 of 1034 (692409)
03-02-2013 5:33 PM
Reply to: Message 259 by Percy
03-02-2013 5:07 PM


Re: Mutations Don't Add Anything That Could Rescue the ToE
Acknowledge your errors, your silly water in water out idea that produced nothing but confusion here and your misuse of the pigeon example -- yes misuse --0 and stop claiming so self righteously that you are the one being misunderstood as if only you are allowed to make that claim and maybe I'll see things differently.
But right now the misrepresentations and the misunderstandings are getting to me and I have to take another break before I explode.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 259 by Percy, posted 03-02-2013 5:07 PM Percy has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 269 of 1034 (692420)
03-02-2013 9:23 PM
Reply to: Message 266 by DBlevins
03-02-2013 6:56 PM


Re: Ring Species -- Greenish Warbler -- and Genetic Diversity
If it does, it's replacing another allele for beak type anyway you know, ...
No, it is not replacing another allele for beak type. It is an addition to possible allele types.
1. Allele for gene that governs beak type. (There may be more than one gene for beak type, this is just to make it simpler.)
2. Mutation occurs in this allele, in an allele that governs beak type. There is a mistake in replication and the allele is changed.
3. Sometimes such changes don't affect the phenotype, in this case the beak itself, sometimes they do. Let's say this one changes what the allele does, and therefore changes the beak type in some way.
4. The mutation has therefore replaced the allele for the other beak type with a new allele for a new beak type.
5. If the change makes a unique beak type then yes, among all the alleles for beak type in the whole gene pool it is an addition to the possible allele types and their beak types.
and surely all the possible beak types are already present in the gene pool
Not all possible beak types are present. Unless you think a crow could be born with a toucan's beak?!?
No, I meant all possible beak types for the species, not toucan type beaks or pelican type beaks etc. I'm assuming there is a limited number of variations possible and that the gene pool already has them all if it's a fairly genetically diverse gene pool.
But the potential range is probably a lot greater than we have any idea, which we might find out by breeding the birds for a particular beak type. We could very possibly get extreme beaks that way just as Darwin got such dramatic changes by determinedly breeding his pigeons for particular characteristics.
so this "increase in diversity" is redundant and as I keep pointing out, once it gets selected the genetic diversity starts getting reduced anyway so it really amounts to nothing new in the end
Get a population with a characteristic beak, lose all the alleles for the other beak types over time if the characteristic beak is favored, but it's even possible the alleles for all the other types are left behind in a migration and the new beak is truly accidental or randomly "selected" by chance.
If a mutation produced the new beak, if it is selected you still have to reduce or lose all the alleles for the other beak types, so then you'll have this population with the mutated beak and reduced genetic diversity in the loss of other alleles for the other beak types which inhibits further change, absolutely stops it cold if ALL the other alleles are lost and the new allele gets paired up with itself in all the individuals in the population, that is, if it reaches the state of fixed loci for its beak type, or total homozygosity for the population. Good luck waiting around for a new allele for a new beak type to show up by mutation, especially since the existing one wouldn't have achieved its position if it hadn't been favored, that is, selected.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 270 of 1034 (692421)
03-02-2013 9:38 PM
Reply to: Message 267 by Dr Adequate
03-02-2013 9:04 PM


Re: Stuff That Actually Happens
The American Curl may be unique in being developed from a mutation, the "increased diversity" is to the tune of one allele as you say, and while they were breeding it with other types of COURSE it would not lose genetic diversity but in fact increase it, hybridization being one of the ways to replenish a depleted gene pool. *Duh*
But once breeding becomes a matter of inbreeding ONLY with American Curls then you'll see the loss of genetic diversity I'm talking about as alleles for all the other types of ears will be reduced and even ultimately disappear from the gene pool altogether.
But it's still possible in my mind that even this very rare characteristic was not a mutation but a very rare combination of existing alleles for perhaps more than one gene. Very rare. Yes, possible. So that you don't really "know" that it was a mutation.
Sorry you find reality so much not to your liking.

This message is a reply to:
 Message 267 by Dr Adequate, posted 03-02-2013 9:04 PM Dr Adequate has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 277 of 1034 (692455)
03-03-2013 2:18 PM
Reply to: Message 258 by Tangle
03-02-2013 4:36 PM


Re: Mutations Don't Add Anything That Could Rescue the ToE
Faith writes:
Genetic isolation is what brings about reduced genetic diversity and in fact with small populations is almost synonymous with reduced genetic diversity.
There is no-one on this thread that disagrees with that. It's purely an arithmetic truth. It's been said over and over. So maybe we can stop agreeing.
Funny but I haven't yet seen ANYONE recognize what I'm talking about except Percy and NoNukes and both of them go on to say things that clearly show they aren't getting it in any consistent way.
Which wouldn't surprise me since although the idea is simple it really isn't easy to keep in mind and it is easy to get it confused. You AREN'T getting it but claiming you are makes the whole thing worse. You assert it but don't demonstrate it.
It's NOT "purely an arithmetic thing" like adding and subtracting as I've said many times already. Just that comment alone proves you don't have a clue. It is NOT water-in-water-out.
It's the next step that you're all screwed up on.
You are the one that's screwed up.
You think that simply having a subset of an existing population somehow allows the smaller group to adapt to a different environment.
I have NOT argued for new populations "adapting to a different environment." I have SPECIFICALLY said more than once that I don't think adaptation is the driving force of the phenotypic changes. You CANNOT read, why do you pretend you can?
The point is that MERE change in gene frequencies is enough to make a new variety, adaptation is NOT the driving force in most cases.
That doesn't make a lot of sense does it?
NOTHING you say makes much sense.
Now to be fair, in some cases this might work. If you read the 'how novel features evolve' thread you'll find the interesting case of the wall lizards. They were isolated and changed their diet from insectavore to vegitarian and developed valves in their bowel to enable the digestion of cellulose. The biologists studying them claim that this was caused by gentic mutation, but as yet, photypic plasticity can't be ruled out.
Since I am not arguing about adaptation this example is ridiculously off topic. Get the argument first, stop claiming you do get it when you obviously don't and since you will not or can not, please exit this thread.

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 Message 258 by Tangle, posted 03-02-2013 4:36 PM Tangle has not replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 278 of 1034 (692456)
03-03-2013 2:20 PM
Reply to: Message 276 by kofh2u
03-03-2013 12:56 PM


BUNCH OF OFF TOPIC POSTS
KOFH2U AND THE ARCHANGEL guy are not on topic in this thread.
Please start your own thread.

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 Message 276 by kofh2u, posted 03-03-2013 12:56 PM kofh2u has not replied

  
Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 279 of 1034 (692457)
03-03-2013 2:25 PM
Reply to: Message 274 by Tangle
03-03-2013 9:21 AM


What on EARTH is your point here? It has NOTHING to do with the point of this thread that I can see.
How is this an example of speciation? And since speciation isn't the main point of my thread what does it have to do with my argument? And if you're trying to prove greater genetic diversity along with speciation why don't you even bother to give the evidence that there IS greater genetic diversity and/or even speciation? And even if both are true OBVIOUSLY IT'S AN EXCEPTION.

This message is a reply to:
 Message 274 by Tangle, posted 03-03-2013 9:21 AM Tangle has not replied

  
Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 280 of 1034 (692461)
03-03-2013 3:00 PM
Reply to: Message 272 by Dr Adequate
03-02-2013 11:15 PM


Re: Stuff That Actually Happens
The American Curl may be unique in being developed from a mutation ...
Why would one think that?
Note that your personal preference is not actually a reason.
Heck, I can think of another case
GOLLY GEE, TWO WHOLE CASES! An epidemic of mutation-based breeds!
And again, you don't KNOW if this was a mutation. Mutations are mostly an imaginary artifact of evolutionism, a sort of god invoked to explain every kind of novelty.
And here you have another EAR anomaly. TWO "mutations" in the EAR! Wow, how likely is that? Sure does seem to me to be far more likely the result of rare but normally occurring. allelic combinations
Faith writes:
But once breeding becomes a matter of inbreeding ONLY with American Curls then you'll see the loss of genetic diversity I'm talking about as alleles for all the other types of ears will be reduced and even ultimately disappear from the gene pool altogether.
DrA writes:
And yet it will still have more genetic diversity than it did when the breed had only one member.
Which proves absolutely nothing with respect to my argument here. Which must need to be repeated AGAIN, since it's so consistently misunderstood:
The argument is that reduced genetic diversity is the natural result of the SELECTING AND ISOLATING processes that PRODUCE new phenotypes.
What you have in this case is something else: you HAVE the new trait or phenotype in one individual and two of its offspring and you are ADDING genetic diversity in order to preserve the trait while PREVENTING the loss of genetic diversity that could threaten the creature.
Yes you can ADD GENETIC DIVERSITY, by cross breeding, by hybridization, by anything that increases GENE FLOW. Interesting that of course this IS how it was done with the Curl instead of relying on the god Mutation to do the work of improving its genetic diversity.
When all you have is a single individual with a trait you want to preserve, that's already a case of such depleted genetic diversity you MUST cross-breed to improve its chances of survival, but adding genetic diversity has nothing to do with FORMING the phenotype which ALWAYS comes about along with reduced genetic diversity. In this case quite extreme, since only the single founding individual had the trait.
You are increasing gene flow, you are not selecting or isolating you are adding; but selection and isolation are the opposite of gene flow and these are THE methods of producing and maintaining new phenotypes or traits.
And if the breed is now to be subjected to more rigorous inbreeding after thirty years of protecting its genetic diversity you will NOW start getting the reduced genetic diversity that is ALWAYS the effect of the selection and isolation processes. I've never made an issue about any particular AMOUNT of genetic diversity, the point is always the TREND in that direction through selection and isolation.
Faith writes:
But it's still possible in my mind that even this very rare characteristic was not a mutation but a very rare combination of existing alleles for perhaps more than one gene. Very rare. Yes, possible. So that you don't really "know" that it was a mutation.
I do in fact, because I know that that's what actual studies show, and I also know that the evidence trumps whatever's going on in your mind.
Haven't seen any actual EVIDENCE here, just the usual evolutionist hocus-pocus invocation of the god Mutation, which can also be invoked in "studies" because of unconscious bias. HOWEVER, I DID acknowledge that PERHAPS it IS a mutation. I merely have my doubts, and now that you've pointed out another "mutation" involving the ear of the cat I have even more doubts.
If it was a combination of alleles, then it would behave rather like a recessive. You could outbreed Curls with non-Curls, some of the non-Curls in the resulting generation would get one of the Curl alleles and some would get the other, and then you could recombine the alleles by breeding that generation together, and get some Curls back. But in fact the Curl breeds exactly as though the trait was caused by a single autosomal dominant allele. 'Cos it is.
But as I understand it there are situations in which even a dominant can be suppressed in the phenotype and brought to phenotypic expression only through a rare combination of alleles for more than one gene. Is that not so?
Sorry you find reality so much not to your liking.
I find it highly congenial. That's why I wrote a post about real things and you responded by writing about imaginary things in your head.
Funny how evolutionists project like this onto creationists. Seems to be your only real accomplishment in these arguments.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 272 by Dr Adequate, posted 03-02-2013 11:15 PM Dr Adequate has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 283 of 1034 (692467)
03-03-2013 4:37 PM
Reply to: Message 282 by Dr Adequate
03-03-2013 4:15 PM


Re: Stuff That Actually Happens
Interesting information about different breeds, thanks.
Are you beginning to see a pattern here, Faith? When we have records of the origin of a new breed, it turns out to have resulted from the recognition of a novel mutation in a single individual,
Well, at least recognition of a novel trait in a single individual, but as for its source being mutation, no you don't know that. You don't know but what thirty years previously the same trait showed up in a remote area where it soon got interbred back into oblivion. These traits on the other hand are showing up where people have enough interest in such things to treat them as something special.
...followed (as a matter of biological necessity) by outbreeding which logically entails increasing the diversity of the breed up from the point at which it had only one member.
Which of course I not only acknowledged but elaborated in my own post.
None of the breeds we've looked at here can have been produced by whittling away at pre-existing genes,
I didn't say they were. Clearly they emerged as single novel traits in individuals (but this in itself doesn't have to be the result of a mutation but can be the result of the simple absence of of the other genetic combinations for other versions of the same trait occurring through normal sexual recombination)
because they are all caused by autosomal dominant alleles; if the curl, fold, wirehair and LaPerm alleles had always existed, then so would Curl, Fold, Wirehair and LaPerm cats.
And for some reason the god Mutation favors autosomal dominant alleles and likes to repeat them for the same trait from time to time?
And again, you don't KNOW if this was a mutation.
Yes I do. For reasons which have been explained to you. If you didn't understand the reasoning, that means that you don't know that it was a mutation. I, on the other hand, do.
And PERHAPS you are right. But I have my doubts nevertheless. As I said, I understand that even dominant alleles can be suppressed in the phenotype and only show up in particular combinations of alleles for more than one gene.

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 Message 282 by Dr Adequate, posted 03-03-2013 4:15 PM Dr Adequate has replied

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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 286 of 1034 (692473)
03-03-2013 5:33 PM
Reply to: Message 281 by Percy
03-03-2013 4:03 PM


Re: Mutations Don't Add Anything That Could Rescue the ToE
I think pretty much everyone in this thread understands your position. You're arguing that the reduction in genetic diversity often associated with isolation of a subpopulation can create a unique subspecies. Everyone agrees with you about this.
Funny they don't say anything to prove it then. I KNOW that at least five posters on this thread got it seriously seriously wrong, confusing genotype with phenotype, and the rest are iffy at best.
You're also arguing three other things. You're arguing that a reduction in genetic diversity can create a new species, and this is false.
IF YOU ARE TALKING ABOUT SPECIATION, that is, new species defined by evolutionists as having lost the ability to interbreed with other populations of the same species, which I assume you mean, then I do believe that too CAN happen but I don't emphasize this. It does follow logically from the idea that new subspecies are formed by the same processes, however. I think it quite likely that the last "species" in a ring species," for instance, could develop the inability to interbreed with the other populations in the ring simply from having lost enough genetic diversity to prevent interbreeding.
In any case this is all PART of my argument, if a secondary part, and not something separate that I'm arguing.
And you're also arguing that mutations play little or no role in speciation, and this is also false.
You assert this over and over but have not proved it. Analogies like water in and water out are certainly not evidence. Mutation is invoked as the answer to reduced genetic diversity's being necessary to evolution although in reality all it can do is delay evolution by countering the necessary processes of selection and isolation. Anything that increases gene flow such as hybridization, cross breeding, etc., will interfere with these processes, and can actually completely destroy the characteristics of a formerly established population by mixing it with others and increasing its genetic diversity. Most traits would just get scattered again or buried in the new mix. The only time a rare trait would be preserved would be in the examples Dr. A is describing where the genetic diversity is replenished by carefully protecting the desired trait from getting swamped.
All mutation could possibly do is add diversity to the same effect as the other sources of gene flow. You get lots of diversity this way, NOT the development of subspecies, let alone Speciation. Only when selection and isolation act on the population once again could you get new subspecies.
And you're arguing that adaptation isn't a much of a factor in selection, and this too is false.
So says the ToE, and all you are doing is asserting the theory, but I believe the facts are simple and obvious: all it takes to form a new variety or breed is new gene frequencies, a fairly frequent and completely random occurrence in nature.
Actually the adaptation argument is not essential to my main argument here, I merely think it is true.
It's NOT "purely an arithmetic thing" like adding and subtracting as I've said many times already. Just that comment alone proves you don't have a clue. It is NOT water-in-water-out.
I assume by "it" you're referring to diversity? If you're not measuring diversity arithmetically then how are you measuring it? If the general population has N total alleles and the subpopulation has N-1 total alleles, can't we say that the subpopulation has less diversity than the main population. And if later the subpopulation has N-2 total alleles, can't we say that it has experienced a further decline in diversity?
But there is something DYNAMIC and not merely arithmetical about the effect on the population that selection and isolation have as opposed to increases in gene flow, mutations or whatnot that add to the genetic diversity. Selection and isolation are not merely subtraction, but something dynamic. It's hard to get it expressed.
Increases in genetic diversity most commonly show up as separate traits in individuals that just meander around in the population, UNTIL some set of them are SELECTED AND ISOLATED as a group, at which point this new collection of traits starts to get inbred, and over a number of generations will eventually develop a new collective phenotype for a new subpopulation or subspecies. This isn't mere subtraction. Subtraction of alleles is NECESSARY to this development but what's going on phenotypically in the new population as a result of the genetic subtraction is the formation of a new subspecies that eventually develops a homogeneous collective character if nothing interferes to prevent it, such as the reintroduction of gene flow.
Now naturally I grant that for more detailed study we might want more complex approaches to measuring diversity,
How I wish
but certainly to a first level of approximation we can say that if a population acquires a new allele then it has experienced an increase in diversity,
Yes but the fact is trivial in context
and if it loses an allele then it has experienced a decrease in diversity.
Also trivial since the important point is that the loss is the cause of the development of a new trait throughout a subpopulation, part of the formation of an entirely new phenotype or variety, which one would think is the important thing to evolutionists, the development of NEW PHENOTYPES TOWARD THE EXPECTATION OF DEVELOPING A NEW SPECIES, which is THE hope of the ToE. But if it takes the reduction of genetic diversity to produce a new subpopulation/new phenotype, then you are not ever going to get anywhere near a whole new species, you'll just keep getting new interesting varieties of the same species until you run out of genetic possibilties for variation. Of course many other varieties can still be forming from the mother populations but they too will eventually come to the same genetic depletion if they keep forming new subpopulations.
And so it *is* just like water-in/water-out in a bathtub where both faucet and drain are simultaneously open. Let's say both the faucet and drain are open only very slightly. Water is dripping into the bathtub through the faucet, and water is dripping out of the bathtub through the drain. Each drop of water represents an allele, and so since our bathtub is full of many drops of water, all the water in the bathtub represents a great many alleles. When a drop of water falls into the bathtub it is like a mutation creating a new allele in a population, and the bathtub has increased diversity. And when a drop of water falls out of the bathtub it is like an allele becoming extinct from the population, and the bathtub has decreased in diversity.
If more drops of water are flowing in to the bathtub than flowing out then this is akin to a population acquiring more alleles through mutation than it is losing through extinction, and as the level of water in the bathtub rises it corresponds to an increase in diversity.
If fewer drops of water are flowing in to the bathtub than are flowing out then this is akin to a population acquiring fewer alleles through mutation than it is losing through extinction, and as the level of water in the bathtub falls it corresponds to a decrease in diversity. If the level of water in the bathtub drops to zero then it corresponds to the subpopulation going extinct.
Now it's perfectly acceptable to me if you personally find this analogy confusing or ill-fitting or whatever, in which case I'll seek other ways of making my point, but it isn't wrong.
Yes it is.
If you're going to continue to claim that the analogy is wrong without explaining in what way it is wrong then I will have to continue to explain that it is not wrong.
Sigh.
I hope maybe I've made my case more clearly above but I'm not holding my breath. I would have thought I was sufficiently clear many times earlier.
You think that simply having a subset of an existing population somehow allows the smaller group to adapt to a different environment.
I have NOT argued for new populations "adapting to a different environment." I have SPECIFICALLY said more than once that I don't think adaptation is the driving force of the phenotypic changes.
Yes, you have, but your position is completely contradictory. You can't have selection by the environment with little or no adaptation to the environment.
But you are adding that part about "selection BY the environment." The selection I'm talking about is brought about by accidental factors in most cases, the mere migration of a portion of a larger population, quite randomly, without any active selection by the environment itself, that's ALL It takes to begin the formation of a whole new subspecies. And since it can occur in exactly the same type of environment with the same kinds of food sources and so on, there is no pressure whatever from the environment. Which isn't to say that such pressures aren't a factor in some environments, and very specific adaptations may certainly occur which we do often see in nature.
That's as nonsensical as if I claimed that when I select songs for my music collection it has no bearing on whether it is adapted to my taste.
Nature has no specific taste the way human beings have. Seems YOU are now the one confusing domestic breeding with natural causes of the development of new subspecies.
Until you construct an argument with some internal consistency you can't hold others to any high standards for decoding what you mean.
I'd just be happy if they'd recognize they are missing the point, whether that is my fault or not.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 281 by Percy, posted 03-03-2013 4:03 PM Percy has replied

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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 288 of 1034 (692479)
03-03-2013 7:10 PM
Reply to: Message 249 by Dr Adequate
03-02-2013 2:37 PM


Re: Questions
When a thread gets this active I miss posts, I even miss whole pages, and if I get in a rush I don't get my thoughts formulated very well.
Anyway I just saw this post for the first time and thought I'd like to answer it, meanwhile of course not answering many others.
Oh well.
So you're asking if we start off with wolves, and we get all the different breeds of dogs
... that represents a decrease in genetic diversity, yes?
Yes. IN EACH NEW BREED, not in the total gene pool which may contain all the original genetic diversity collectively.
'Cos obviously looking at the two pictures, the question that comes to mind is: "Damn, where did all the diversity go?"
Beware of the term "diversity" without the modifier "genetic."
My argument, again, is this: To get all that PHENOTYPIC variation requires that each phenotype or breed LOSE the genetic diversity for all the other breeds.
EACH phenotype or subspecies or breed has its own peculiar collection of alleles and genes, and NOT those for the other phenotypes or subspecies or breeds, although some of course may still be in the gene pool but not expressed. However, if the breed "breeds true" it won't have them at all for its characteristic traits, it will be homozygous for its own pecular characteristics.
Is it therefore true that if the process had gone the other way --- if we'd started off with all those dog breeds and ended up with two wolves on some sort of a magic boat --- we'd have increased genetic diversity?
The question seems nonsensical but to make some sort of sense of it, IF we just let all those new breeds of dogs interbreed with each other, or perhaps made sure we got them all mixed together with some careful assistance, for some great number of generations, would the result be anything like the wolf from which they all descended? Probably not but I'm not sure I could say why.
Now the other question I'd like answered (I've asked this before, perhaps you were busy)
Most likely
is whether there are any theoretical limits to what this reduction in diversity can achieve. If it can produce all these nondiverse dog breeds from a common ancestor, could not an even greater loss of diversity have produced (for example) all mammals from a common ancestor? If not, why not? If you started off with this:
I'm actually very glad these questions got asked because they make it clear just how I am not getting across my point -- or even if I'm not sure how at least I see that I AM being misunderstood as I have been able to tell although it is being denied right and left here.
Anyway.
The question is, basically, if reduction in diversity can produce so many new phenotypes why couldn't it produce the entire array of living things that evolution claims selection does?
...could not an even greater loss of diversity have produced (for example) all mammals from a common ancestor? If not, why not?
Because you eventually run out of genetic possibilities as a result of continued loss of genetic diversity. You eventually arrive at a point of genetic depletion beyond which further development of phenotypes cannot occur. You have come to the end of Evolution.
For a particular line of variation, for a particular breed or variety or subspecies.
So I'll use dogs again. All those different dog breeds are separate lines of variation from the original wolf--- as a general rule (that is, there may of course have been many cross-breedings and hybridization and remixing of gene pools along the line in some cases, but AS A GENERAL RULE each breed was produced by selection of its own particular traits accompanied by loss of the alleles for different traits, which is what I mean by the reduction of genetic diversity, which may even be not just reduction but complete loss of the genes/alleles for other versions of its own characteristic traits. The breed may be homozygous at those genes if they breed true for those traits, the alleles for all the OTHER traits having been left back in the previous populations, the other breeds, the wolf itself perhaps (although it's important to remember that by being the source of all those different breeds the wolf too would have lost numbers and therefore genetic diversity as well.)
The point again is that you get such great PHENOTYPIC diversity BY losing GENETIC diversity, and on any particular line where new phenotypes are developing IF the processes keep repeating from new subspecies to new subspecies you will eventually run out of genetic possibilities while still getting only a new version of a dog, or a cat, or whatever it is you started out with. The new breeds or varieties are being formed merely by smaller numbers from the former populations of the same species, forming new populations that breed only among themselves, their own gene pool (which with dogs and cats would HAVE to be human-guided or it would never happen with the promiscuous little beasts, but anyway in the process of inbreeding they will develop the traits peculiar to their own subset of genes and alleles, which exist in new frequencies compared to the former or mother population's gene pool.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 249 by Dr Adequate, posted 03-02-2013 2:37 PM Dr Adequate has replied

Replies to this message:
 Message 289 by Dr Adequate, posted 03-03-2013 8:37 PM Faith has replied

  
Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 291 of 1034 (692483)
03-03-2013 9:29 PM
Reply to: Message 289 by Dr Adequate
03-03-2013 8:37 PM


Re: Questions
Because you eventually run out of genetic possibilities ...
Sure, eventually but not before the awesome diversity of the morganucodons has been whittled down to the nondiversity displayed by such relatively homogeneous creatures as the elephant, the giraffe, the weasel, the whale, the bat ...
Whew! Must say that the imaginative fantastical wishfulness of the evolutionist takes the breath away. How could one fight such castles in the air? There are always many more where those came from.
Oh well, we try.
Clearly what happened here is that some lineages descending from the morganucodons lost the genes for not being elephants, others lost the genes for not being bats, and so forth, until from the rich genetic diversity of the morganucodons, we ended up with the genetically impoverished wasteland of the modern Mammalia.
Well, back to reality for a moment here. What really happens is that the genetic diversity that gets eaten up is the diversity that belongs to the particular Kind because the genome that is losing diversity contains only the genes/alleles for that Kind or Species or Baramin which is developing so many new varieties, phenotypes, subspecies. You are losing alleles for the SAME genes/traits you are developing into phenotypes, not alleles for traits that belong to elephants or bats, but only the traits that belong to the species you are breeding or that is evolving new subspecies.
This all goes on WITHIN the existing genotype. To get from that to some other genotype would require not addition in the sense of mutations, which also only gets eaten up by the selection processes anyway, but structural changes in the genome which are not part of the observed formation of phenotypes as we know them. You are always only getting dogs from dogs (and here I do think of the wolf as just the original Dog anyway), cats from cats, elephants from elephants and so on.
But of course I mustn't underestimate the power of the evolutionist imagination to get elephants out of dogs or whatever, or to get alleles for elephant trunks out of alleles for dog noses etc., which is all they have anyway, the whole ToE being nothing but an imaginative construct into which they cram all the facts of reality, which don't fit very well but that doesn't stop them.
Obviously after so much diversity has been lost, all that this process can produce nowadays is the wide range of nondiversity seen in all the various breeds of dogs, cats, pigeons, etc. But it is clear that any amount of diversity could have been destroyed in the past, even narrowing down diversity from the genetic abundance of a single ancestral species to the lack of diversity displayed by the many families of modern mammals.
Far as I know or would suppose, there is probably yet a great deal of genetic diversity in many of the Species or Kinds.
Well since I can't beat mental castle-building I might as well get some sleep.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

He who surrenders the first page of his Bible surrenders all. --John William Burgon, Inspiration and Interpretation, Sermon II.
2Cr 10:4-5 (For the weapons of our warfare [are] not carnal, but mighty through God to the pulling down of strong holds Casting down imaginations, and every high thing that exalteth itself against the knowledge of God...

This message is a reply to:
 Message 289 by Dr Adequate, posted 03-03-2013 8:37 PM Dr Adequate has replied

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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 323 of 1034 (726261)
05-07-2014 1:13 PM
Reply to: Message 322 by NoNukes
05-06-2014 10:47 AM


Re: Good idea, next step
Only for the traits that define the breed,
Which I'm careful to say.
and even those genes can mutate. How can you even type that stuff without noticing the idiocy? Yes there is some limitation on Mendelian recombination, but evolution is not limited to that.
The fact is you do get stable species and those traits don't mutate or the mutations don't spread in the population because if they did you wouldn't have a species. But you do have species. (Mutations and their spread n the population are an article of faith anyway; the probability of this happening at any rate that you would need it to happen to stop the effects of the NECESSARY reduction in genetic diversity that MUST happen for a species to form, is just about nil. Witness cheetah, witness elephant seal.
And how does the parent species manage to "breed true" with all of that extra diversity? [/q]
It can't, increased diversity interferes. Nevertheless you do get true breeds. Therefore you aren't getting the increased diversity you think you are, the mutations you think you are getting.

This message is a reply to:
 Message 322 by NoNukes, posted 05-06-2014 10:47 AM NoNukes has replied

Replies to this message:
 Message 325 by NoNukes, posted 05-07-2014 1:34 PM Faith has replied
 Message 327 by PaulK, posted 05-07-2014 1:41 PM Faith has replied

  
Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 324 of 1034 (726263)
05-07-2014 1:26 PM
Reply to: Message 321 by NoNukes
05-06-2014 10:43 AM


Re: Mutations Don't Add Anything That Could Rescue the ToE
Percy writes:
It is apparently your view that a new species can more likely form from existing variation than from novel variation. Does that really make sense to you?
I'll answer this here. The point is that I don't believe this novel variation exists, or if it exists at all not to any extent sufficient to produce viable alleles for the formation of a species. Sometimes I'll allow for the sake of argument that this is happening although I believe it doesn't, because there is no difference as far as the outcome goes: you still are getting changed allele frequencies when there is a population split and the expression of whatever traits are high frequency and dominating in the new population occurs along with the reduction or elimination of competing traits, i.e. competing alleles for other versions of those traits. You aren't going to get a new trait picture without the elimination of competing alleles. If you get an increase in diversity you just don't get the new trait picture, you'll never get a species.
For all intents and purposes it really doesn't matter if the variants are produced by mutation or by builtin alleles anyway; in either case selection leads to reduced genetic diversity.
NN writes:
It does if you imagine species formation to be God acting as a cosmic breeder and if you completely discount mutations while pretending not to do so.
Total straw man of course, just a refusal to understand what I'm saying. Mutations would only act as gene flow acts, to produce new variants for selection to act upon. For species to develop requires selection or the culling of traits that are not part of the new trait picture of the species. This cujlling is a decrease in genetic diversity for the new population /subspecies /species. This decrease HAS to happn if you are getting a new trait picture or a new species. This is exemplified easily with domestic breeding: you can't get a distinctive breed when alleles for traits that are not part of the breed you want keep showing up in individuals. These have to go if there is to be a distinctive breed. In the wild you do get distinctive new species, so what has to be happening there is that the traits for these species are developing in the absence of alleles for other traits. It's simple, it's obvious, it has to happen or the species that do in fact occur wouldn't be occurring.
It does if you imagine that every new species cannot have any significant characteristics of the parent species.
But of course it can, I've never said otherwise, all I've been emphasizing is that a new species IS different from the pareht species or it wouldn't BE a newq species. This doesn't mean that it doesn't share a great deal with the parent.
qIn short, it is pretty easy to build a straw man version of evolution to attack and dismiss, particularly if the only one you need to convince is yourself
It's even easier to build a straw man version of any idea that contradicts evolution because there are so many of you and you have a vested interest in your theory.
Edited by Faith, : No reason given.

This message is a reply to:
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Replies to this message:
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Faith 
Suspended Member (Idle past 1466 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 326 of 1034 (726265)
05-07-2014 1:36 PM
Reply to: Message 325 by NoNukes
05-07-2014 1:34 PM


Re: Good idea, next step
Species do not consist of a homogeneous set of individuals.
Huh?
Or: Yeah. So? And?
The diversity of the human race, which is a not just a single species but is a single sub species is a perfect example.
Huh?
Or: So? And?
Your thesis of " diversity interferes with creation of species" is easily seen as so much bunk even based on your own statements.
Have no idea what you're talking about except that it's some kind of weird straw man.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 325 by NoNukes, posted 05-07-2014 1:34 PM NoNukes has replied

Replies to this message:
 Message 330 by NoNukes, posted 05-07-2014 2:12 PM Faith has replied

  
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