There seems to be a bit of a leap of assumptions here. The claim is that, since
this organism is doing just fine without all that non-coding DNA, it must not, therefore, serve any purpose in
that organism. The conclusion doesn't really seem justified.
I've heard to argued that a lot of 'Junk DNA' may serve a function in the sense that it keeps particular parts of coding DNA distant from each other. The DNA of the bladderwort may have evolved a particular formation that meant most of this DNA could be safely removed without harm, but this doesn't mean you could do the same thing to another organism's DNA - since it may require a different formation to function effectively.
By analogy, we could point to the fact that the tail has shrunk to a vestigial remnant of its former self in ape evolution. We would not be justified in concluding from this that tails are an irrelevance with no function in the animals that still possess them.