There are both Y chromosome and autosomal phylogenetic studies starting to pop up. What will eventually be very interesting will be whole genome phylogenetic comparisons. Though there are both technical and statistical problems (the phase problem) with non-sex linked loci, the nucleus does provide a much larger set of loci evolving at different rates so that one can address both deep evolutionary branches as well as more recent speciation events. That is why I am against sole reliance on mtDNA...that and the fact that one can get totally thrown off by nuclear integrations of mtDNA which appear mtDNA like but are actually nuclear encoded pseudogenes. This can throw off phylogenetics when not recognized. A great example of this was the mid-90's claim that dinosaur DNA had been retrieved. It turned out to be a human mtDNA pseudogene of modern origin...as Homer Simpson would say..Doh!!!
Cheers,
Mammuthus
[QUOTE]Originally posted by Dr_Tazimus_maximus:
[B][QUOTE]Originally posted by Mammuthus:
I for one would be happy if more phylogenetics would switch to nuclear DNA...after all there are 3 billion bp in the nucleus versus around 16 K in mtDNA yet nuclear DNA has long been ignored.
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There have been some studies w.r.t. male chromosomes w.r.t. phylogenetics due to the more linear transmission as compared to non-sex linked chromosomes and relative lack of crossover. There were a few pieces published in the last couple of years in the journals Science and Nature w.r.t. human migration patters and possible links between H. sapiens sapiens and H. sapiens neandertalis.
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