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Author Topic:   The End of Evolution By Means of Natural Selection
Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 511 of 851 (556976)
04-22-2010 12:47 AM
Reply to: Message 510 by Dr Adequate
04-21-2010 11:39 PM


Re: juggling alleles
On that Wikipedia page that Dr. A changed, the idea is that drift and selection will act independently in both populations until eventually they become genetically incompatible. Dr. A wanted to insist that that couldn't happen without mutations but the original page didn't include mutations and I would think if it were considered essential it would have been included -- it couldn't even occur to them to leave it out in that case.
Happened to catch it in that condition and this is what I think about why it was in that condition, and I still think it.
And it only got changed because an idiot creationist's view of it annoyed you.

This message is a reply to:
 Message 510 by Dr Adequate, posted 04-21-2010 11:39 PM Dr Adequate has not replied

  
PaulK
Member
Posts: 17825
Joined: 01-10-2003
Member Rating: 2.2


Message 512 of 851 (556987)
04-22-2010 1:41 AM
Reply to: Message 506 by Faith
04-21-2010 7:34 PM


Re: This argument doesn't depend on the Bible
quote:
Yes, but he's saying I'm contradicting YEC views and I know I'm not contradicting that one.
In fact what I am saying is that genetic diversity is already too high to be easily explained if the YEC Flood story is assumed - even if we assume that the Ark carried modern species rather than Creationist "kinds". And your insistence that genetic diversity is continuously decreasing makes that problem far worse. This is so clearly true that I cannot see how you could even hope to deny it.

This message is a reply to:
 Message 506 by Faith, posted 04-21-2010 7:34 PM Faith has replied

Replies to this message:
 Message 513 by Faith, posted 04-22-2010 1:51 AM PaulK has replied

  
Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 513 of 851 (556989)
04-22-2010 1:51 AM
Reply to: Message 512 by PaulK
04-22-2010 1:41 AM


Re: This argument doesn't depend on the Bible
In fact what I am saying is that genetic diversity is already too high to be easily explained if the YEC Flood story is assumed - even if we assume that the Ark carried modern species rather than Creationist "kinds". And your insistence that genetic diversity is continuously decreasing makes that problem far worse. This is so clearly true that I cannot see how you could even hope to deny it.
I don't think I deny that it's hard to explain, do I? I know it's hard to explain, I'm simply trying out some possibilities, and I don't think this has to be resolved in order to pursue my current argument.
To try to explain it I have to start with the obvious fact that whatever the genetic situation was on the ark it wasn't anything like it is today, and try to imagine possible genetic scenarios that could have been the case. I assume a geneticist would do a better job of it than I do if he could accept the premises for the purpose.

This message is a reply to:
 Message 512 by PaulK, posted 04-22-2010 1:41 AM PaulK has replied

Replies to this message:
 Message 514 by PaulK, posted 04-22-2010 2:14 AM Faith has replied

  
PaulK
Member
Posts: 17825
Joined: 01-10-2003
Member Rating: 2.2


(1)
Message 514 of 851 (556991)
04-22-2010 2:14 AM
Reply to: Message 513 by Faith
04-22-2010 1:51 AM


Re: This argument doesn't depend on the Bible
quote:
I don't think I deny that it's hard to explain, do I? I know it's hard to explain, I'm simply trying out some possibilities, and I don't think this has to be resolved in order to pursue my current argument.
In other words what I am saying IS true, contrary to your assertion.
quote:
To try to explain it I have to start with the obvious fact that whatever the genetic situation was on the ark it wasn't anything like it is today, and try to imagine possible genetic scenarios that could have been the case. I assume a geneticist would do a better job of it than I do if he could accept the premises for the purpose.
By which you mean that your Flood scenario REQUIRES radical differences to the genetics of the animals on board, differences which somehow produced the diversity we see today. And you don't know enough to construct an answer that is in the least bit plausible. Yet you don't see the need to invoke such massive ad hoc assumptions as a problem in your position ? Since you haven't got any real evidence that genetic diversity is decreasing maybe you should reconsider that assumption instead.

This message is a reply to:
 Message 513 by Faith, posted 04-22-2010 1:51 AM Faith has replied

Replies to this message:
 Message 515 by Faith, posted 04-22-2010 2:22 AM PaulK has replied

  
Faith 
Suspended Member (Idle past 1465 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 515 of 851 (556993)
04-22-2010 2:22 AM
Reply to: Message 514 by PaulK
04-22-2010 2:14 AM


Re: This argument doesn't depend on the Bible
I don't think I deny that it's hard to explain, do I? I know it's hard to explain, I'm simply trying out some possibilities, and I don't think this has to be resolved in order to pursue my current argument.
In other words what I am saying IS true, contrary to your assertion.
Sorry, I guess I still don't know what you're saying.
To try to explain it I have to start with the obvious fact that whatever the genetic situation was on the ark it wasn't anything like it is today, and try to imagine possible genetic scenarios that could have been the case. I assume a geneticist would do a better job of it than I do if he could accept the premises for the purpose.
By which you mean that your Flood scenario REQUIRES radical differences to the genetics of the animals on board, differences which somehow produced the diversity we see today.
Yes, of course.
And you don't know enough to construct an answer that is in the least bit plausible.
Thought a "packed" genome was a pretty good start myself.
Yet you don't see the need to invoke such massive ad hoc assumptions as a problem in your position ?
Not in my current argument. It's a completely separate issue. I'm trying to stick to what I understand to actually occur in the present, whether anybody here thinks I'm right about that or not, I'm not speculating about an utterly different situation in the distant past.
Since you haven't got any real evidence that genetic diversity is decreasing maybe you should reconsider that assumption instead.
It's logical that it's decreasing. There isn't anything else it could do. Even with mutations.
Edited by Faith, : No reason given.

This message is a reply to:
 Message 514 by PaulK, posted 04-22-2010 2:14 AM PaulK has replied

Replies to this message:
 Message 516 by PaulK, posted 04-22-2010 3:11 AM Faith has replied

  
PaulK
Member
Posts: 17825
Joined: 01-10-2003
Member Rating: 2.2


(1)
Message 516 of 851 (556997)
04-22-2010 3:11 AM
Reply to: Message 515 by Faith
04-22-2010 2:22 AM


Re: This argument doesn't depend on the Bible
quote:
Sorry, I guess I still don't know what you're saying.
I am saying that if you already have a problem that genetic diversity is too high because of an assumed past bottleneck, arguing that it must also decrease over time only makes the problem worse.
quote:
Thought a "packed" genome was a pretty good start myself.
Since it only gets you extra genes, not extra alleles for the genes that are retained it doesn't seem to be very helpful. Maybe it would account for related species having some different genes, but that's all. And of course it is pure speculation.
quote:
Not in my current argument. It's a completely separate issue. I'm trying to stick to what I understand to actually occur in the present, whether anybody here thinks I'm right about that or not, I'm not speculating about an utterly different situation in the distant past.
I don't think that it is a separate issue. If genetic diversity can't increase then it cannot have been lower in the past. And, of course, the only reason why you are saying that it is completely different is because there is a clear problem with current genetic diversity. There's no direct evidence of this alleged difference.
quote:
It's logical that it's decreasing. There isn't anything else it could do. Even with mutations.
No, it's not logical. It's an unevidenced assumption. Especially as it relies in not counting the increases in diversity from mutation.

This message is a reply to:
 Message 515 by Faith, posted 04-22-2010 2:22 AM Faith has replied

Replies to this message:
 Message 527 by Faith, posted 04-22-2010 12:12 PM PaulK has replied

  
Peepul
Member (Idle past 5039 days)
Posts: 206
Joined: 03-13-2009


Message 517 of 851 (557000)
04-22-2010 3:54 AM
Reply to: Message 486 by misha
04-21-2010 10:22 AM


Re: Mutations Revisited 2
quote:
I see what you're saying. But I think you're wrong in assuming that large dogs and small dogs can't mate. Yes, it is a physical barrier for a large male dog to impregnate a small female dog. And it is a physical barrier for a small female dog to carry a large dog offspring to term. But if you flip the genders reproduction is easily possible. Other than the fact that the large female dog would have to be laying down, is there any reason why a small male dog physically could not impregnate her? Is there any reason why the large female could not carry a small offspring to term?
My wife's old roommate had a rotweiller/dacshund mix. Rotweiller mother, dacshund father. The smaller father had minimal issues impregnating the larger mother and the larger mother had minimal issues carrying the pups to term. The dog grew to be larger than a dacshund but smaller than a rotweiller, a hybrid. A male dog from the litter could easily impregnate another female rotweiller or a female dachshund and then you would have fourth and fifth size variants.
Unless there is a mechanism that would create barriers for a large mother/small father combination then I don't think size could be the lone cause of a speciation event. ?
Very good points Misha.
Do you think the same is true of the smallest and largest dogs, eg chihuahua and great dane? There I can see the logistics being a problem!

This message is a reply to:
 Message 486 by misha, posted 04-21-2010 10:22 AM misha has replied

Replies to this message:
 Message 520 by misha, posted 04-22-2010 9:36 AM Peepul has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


(1)
Message 518 of 851 (557003)
04-22-2010 4:32 AM
Reply to: Message 507 by RAZD
04-21-2010 8:10 PM


Re: Mutations Revisited 2 - super-pac magic animals
... Someone had suggested polyploidy at one time so I consider that a possibility for how their genome was different from ours. ...
Which still does not produce new genes nor new alleles, it is a mutation that duplicates whole genes.
I think what Faith is talking about is another form of supergenome. She is suggesting that the initial ancestral organisms, in a flood scenario presumably the breeding pair Noah selected, had very high ploidy compared to modern organisms, and therefore had multiple alleles for each gene. There are some modern animals with high ploidy, particularly the various species of Xenopus which can be up to dodecaploid having 12 sets of chromosomes, but even in this case that would give you a maximum of 24 alleles for every gene.
It does rather beggar belief that Faith can at once be so scrupulous as to deny the role of mutation in creating standing variation unless we have expirimentally observed the mutation ourselves, something that is well established and routinely demonstrated, but then put forward totally unsupported mechanisms with not a shred of evidence as if they were a sufficient alternative explanation.
TTFN,
WK

This message is a reply to:
 Message 507 by RAZD, posted 04-21-2010 8:10 PM RAZD has seen this message but not replied

Replies to this message:
 Message 519 by Percy, posted 04-22-2010 9:13 AM Wounded King has replied
 Message 529 by Faith, posted 04-22-2010 12:28 PM Wounded King has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


(1)
Message 519 of 851 (557030)
04-22-2010 9:13 AM
Reply to: Message 518 by Wounded King
04-22-2010 4:32 AM


Re: Mutations Revisited 2 - super-pac magic animals
Wounded King writes:
I think what Faith is talking about is another form of supergenome. She is suggesting that the initial ancestral organisms, in a flood scenario presumably the breeding pair Noah selected, had very high ploidy compared to modern organisms, and therefore had multiple alleles for each gene. There are some modern animals with high ploidy, particularly the various species of Xenopus which can be up to dodecaploid having 12 sets of chromosomes, but even in this case that would give you a maximum of 24 alleles for every gene.
Very high ploidy? You mean multiple copies of the chromosomes so that there are multiple copies of the genes in those chromosomes, and that in each chromosome the genes contain different alleles so that this could act as a store of many different alleles for each gene, but that except in some flowering plants and some other cases primarily from the plant kingdom all those duplicate chromosomes are now gone but their alleles have been distributed into the sole remaining gene throughout the population.
Something like this is what you think Faith is saying? Really? Especially since it would take something like, oh, I don't know, MUTATIONS to eliminate all the duplicate chromosomes, either gene-by-gene or all at once? Are there any examples of a chromosome in the midst of the gene-by-gene loss possibility of chromosome loss?
It seems to me that what you've proposed is a scenario in which Faith could have the store of "built in" alleles she needs that would otherwise render her proposal trivially wrong due to the genetic bottleneck of the flood, but which is itself wildly improbable.
Apologies for the sarcasm, I've already been Faith'd twice in the past 24 hours, and I despair at the careful explanations I'm going to have to devise for her Message 509 that she'll then not understand, which will make three times.
--Percy
Edited by Percy, : Typo.

This message is a reply to:
 Message 518 by Wounded King, posted 04-22-2010 4:32 AM Wounded King has replied

Replies to this message:
 Message 522 by Wounded King, posted 04-22-2010 10:08 AM Percy has replied
 Message 530 by Faith, posted 04-22-2010 12:36 PM Percy has replied

  
misha
Member (Idle past 4649 days)
Posts: 69
From: Atlanta
Joined: 02-04-2010


Message 520 of 851 (557034)
04-22-2010 9:36 AM
Reply to: Message 517 by Peepul
04-22-2010 3:54 AM


Re: Mutations Revisited 2
Peepul writes:
Do you think the same is true of the smallest and largest dogs, eg chihuahua and great dane? There I can see the logistics being a problem!
I'm not sure. I don't breed dogs for a living. However, logistically I think the main issue would be ejaculation of the male chihuahua into the female dane. This is where I could see an issue. Is the male chihuahua's phallus large enough to make enough contact with the vaginal wall of the dane in order to induce the ejaculation?
Sorry, didn't mean to be so graphic with that. But i can't think of another way to explain it scientifically.

This message is a reply to:
 Message 517 by Peepul, posted 04-22-2010 3:54 AM Peepul has not replied

Replies to this message:
 Message 521 by Percy, posted 04-22-2010 9:59 AM misha has not replied
 Message 523 by Huntard, posted 04-22-2010 10:13 AM misha has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 521 of 851 (557038)
04-22-2010 9:59 AM
Reply to: Message 520 by misha
04-22-2010 9:36 AM


Re: Mutations Revisited 2
The speed and mobility of sperm is incredible!
--Percy

This message is a reply to:
 Message 520 by misha, posted 04-22-2010 9:36 AM misha has not replied

  
Wounded King
Member
Posts: 4149
From: Cincinnati, Ohio, USA
Joined: 04-09-2003


(1)
Message 522 of 851 (557042)
04-22-2010 10:08 AM
Reply to: Message 519 by Percy
04-22-2010 9:13 AM


I see no sarcasm
It seems to me that what you've proposed is a scenario in which Faith could have the store of "built in" alleles she needs that would otherwise render her proposal trivially wrong due to the genetic bottleneck of the flood, but which is itself wildly improbable.
Apologies for the sarcasm
I didn't notice any sarcasm, I think those are exactly the sort of things Faith is proposing, and she isn't the first. Bear in mind that she doesn't seem to have any objection to something like mutation facilitating her fanciful hypotheses, she only seems to object to the existence of beneficial mutations which increase genetic variation in a population. I think all such ad hoc creationist mechanisms are highly prone to the same problem of kind of explaining something but in themselves being wildly improbable.
The idea that a creationist will come here with hypotheses that are reasonable, coherent and show any familiarity with biology is itself wildly improbable, I would have thought you had been doing this long enough to realise that?
TTFN,
WK

This message is a reply to:
 Message 519 by Percy, posted 04-22-2010 9:13 AM Percy has replied

Replies to this message:
 Message 526 by Percy, posted 04-22-2010 11:14 AM Wounded King has not replied
 Message 531 by Faith, posted 04-22-2010 12:50 PM Wounded King has not replied
 Message 554 by RAZD, posted 04-22-2010 7:25 PM Wounded King has not replied

  
Huntard
Member (Idle past 2316 days)
Posts: 2870
From: Limburg, The Netherlands
Joined: 09-02-2008


Message 523 of 851 (557043)
04-22-2010 10:13 AM
Reply to: Message 520 by misha
04-22-2010 9:36 AM


Re: Mutations Revisited 2
misha writes:
Sorry, didn't mean to be so graphic with that. But i can't think of another way to explain it scientifically.
You think that was graphic? Be glad you didn't pair them the other way around then. "Ripped to fucking shreds" comes to mind...

This message is a reply to:
 Message 520 by misha, posted 04-22-2010 9:36 AM misha has not replied

  
Blue Jay
Member (Idle past 2719 days)
Posts: 2843
From: You couldn't pronounce it with your mouthparts
Joined: 02-04-2008


(1)
Message 524 of 851 (557044)
04-22-2010 10:31 AM
Reply to: Message 509 by Faith
04-21-2010 10:49 PM


Playing Atari
Hi, Faith.
Faith writes:
If that's my "whole model," then why hasn't anyone addressed it to show that speciation can occur with allele increase? I've maintained over and over that it can't, that new variations depend on isolation and reduction and increase only tends to a mixed multitude of the same species without creating new variations -- but except for asserting over and over that I'm wrong I don't recall a single attempt to prove it.
This has been addressed multiple times already, you just haven’t recognized it as such.
When I try to visualize your argument, I think of the old Atari game Asteroids (yes, I am old enough to have played it*).
*...if by it, you mean the version that was remade for Windows in the early 1990’s).
Have you played that game? When you shoot an asteroid, it breaks into two or more smaller pieces. Then, if you shoot the pieces, they break into two or more even smaller pieces. It continues like this until the asteroid pieces are so small that the next shot disintegrates them.
This is very much analogous to your argument, if we think of the size of the asteroids as representing the genetic diversity of distinct populations. When an asteroid (population) is broken into two pieces, the two pieces are smaller (less diverse) than the original asteroid (population). With enough shots, the player can destroy all asteroids on the screen (drive all populations to extinction). This is akin to the process of evolution as you see it happening: reduction by fragmentation until there is nothing left.
What this model does not incorporate is the opposite effect. Like you say, IF mutations can create new variations in the population, genetic diversity in the population increases as mutations happen (your words were, ...tends to [make] a mixed multitude of the same species...).
An analogy for the game Asteroids would be a game mechanic that allows the asteroids to grow in size over time. Think of the consequences of this: you could shoot an asteroid, breaking it into smaller pieces, and the pieces could subsequently grow until they were as large or larger than the original asteroid. If a player is a poor shot, the asteroids’ growth could easily outpace the player’s ability to break them up, and the player would never be able to clear the screen of asteroids. In fact, the player may end up with many more---and much bigger---asteroids then he started with!
This is what we hypothesize about evolution (in a very simple, abstract way): genetic diversity can accumulate before, during and after speciation, because of the inevitable process of mutation. Regardless of what causes speciation/isolation, mutation will happen, and can, in fact, counteract the negative effects of natural selection and genetic drift on diversity.
Thus, populations are not necessarily doomed to wallow in shallow gene pools forever: if they can survive genetic bottlenecks, and if new mutations can add genetic diversity, there remains no reason to think they cannot evolve.
This is what evolution is all about: mutation to produce more product, and selection to pare it down by functionality. It is fundamentally a question of the rate of accumulation of new alleles versus the rate of extremination of old alleles.
Edited by Bluejay, : Small addition.

-Bluejay (a.k.a. Mantis, Thylacosmilus)
Darwin loves you.

This message is a reply to:
 Message 509 by Faith, posted 04-21-2010 10:49 PM Faith has replied

Replies to this message:
 Message 532 by Faith, posted 04-22-2010 1:02 PM Blue Jay has replied

  
Blue Jay
Member (Idle past 2719 days)
Posts: 2843
From: You couldn't pronounce it with your mouthparts
Joined: 02-04-2008


Message 525 of 851 (557046)
04-22-2010 10:42 AM
Reply to: Message 507 by RAZD
04-21-2010 8:10 PM


Re: Mutations Revisited 2 - super-pac magic animals
Hi, RAZD.
RAZD writes:
You have a gene for hair production. Hair can be blond, brown, red and black, curly, wavy and straight. These are the effects of alleles on the gene for hair production. To turn hair into something else (spines? quills?) you need to change the gene that produces hair.
I'm not sure I agree with this part. I can envision porcupine quills as being generated from the same combination of genes that produce our hair, with different patterns of expression.
For instance, a mutation that causes overexpression of factors influencing the rate of deposition of fibrous materials in the hair could easily result in stiffer, larger hairs. This could be accomplished by creating the equivalent of a new allele, rather than an entire new gene.
Certainly, I'll grant that a new gene could be an important factor in the development of a new feature or structure, but I'm not sure that it's actually necessary.

-Bluejay (a.k.a. Mantis, Thylacosmilus)
Darwin loves you.

This message is a reply to:
 Message 507 by RAZD, posted 04-21-2010 8:10 PM RAZD has seen this message but not replied

  
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