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Author Topic:   Modularity, A distinguishing property of life
Percy
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Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 76 of 291 (513442)
06-28-2009 8:22 PM
Reply to: Message 73 by Hyroglyphx
06-28-2009 5:14 PM


Re: Instantaneous -- NOT ... Now define life.
We understand that you believe science should define a hard line between living and non-living matter, but reality is rarely black and white. When does dusk become evening? When do foothills become mountains? When does harbor become sea?
The transition between all these distinctly different states is slow and gradual, and science believes that the change from non-life to life was also slow and gradual, not due to some sudden event.
What does this have to do with the thread's topic, Modularity, A distinguishing property of life, and couldn't you find a reference more recent than the 1902 Encyclopaedia Britannica?
--Percy

This message is a reply to:
 Message 73 by Hyroglyphx, posted 06-28-2009 5:14 PM Hyroglyphx has replied

Replies to this message:
 Message 80 by Hyroglyphx, posted 06-28-2009 11:31 PM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 96 of 291 (513499)
06-29-2009 8:53 AM
Reply to: Message 80 by Hyroglyphx
06-28-2009 11:31 PM


Re: Instantaneous -- NOT ... Now define life.
Hyroglyphx writes:
Percy writes:
couldn't you find a reference more recent than the 1902 Encyclopaedia Britannica?
If you say life came from non-life, is it an unreasonable request to define what life is?!?!...I thought it was excellent, regardless of the age.
Huxley's article is an excellent example of Victorian science writing, but his definition of life is more than a century old. As others have mentioned, we have learned much since the 1880's when Huxley likely wrote that article (for example, about the existence of viruses and prions). Any modern definition of life will be more circumspect and nuanced, as well as much more informed.
I would agree that what led up to the event was slow and gradual. But the point in time where something was non-living to living couldn't have been slow, lest you think that the very first organism was in a state of limbo, neither living nor non-living.
Let's follow your reasoning and see where it leads. So the development of the first life was slow and gradual, but you believe it led up to an "event" which was the beginning of the first life. But unless you believe that unlike the rest of the process that the "event" was something large and sudden, this "event" was just one tiny element amidst all the rest of the tiny elements of the slow and gradual process. How are you going to identify that "event"?
The obvious answer is that you cannot. No definition of life could ever cut so fine as to distinguish between two complex chemical systems differing by perhaps only a single molecule, and no consensus of scientific opinion would ever develop around any definition so incredibly detailed, not to mention that our knowledge of the details of life's origin is so sparse that we could not even attempt so detailed a definition anyway.
One can see scientific arenas in which the definition of life might be important. For example, NASA needs to be able to report whether it has discovered life on Mars (more for public relations than for scientific reasons), and so it needs a very specific definition. But the origin of life needs no such precise definition. Origins of life researchers are for the most part not very interested in finding where to draw the line between non-life and life. What they're seeking is a realistic natural process by which life might have gradually developed. At what specific point during the process non-life became life is a side issue of not much significance.
It doesn't. I don't even know how we arrived at this discussion. If you would like it to be more relevant, perhaps we can take this debate to RAZD's thread.
I don't know which RAZD thread you mean, but there must be at least a hundred threads where this discussion would be more on-topic than it is here. If you decide to switch to a more pertinent thread just post a note here letting us know which one.
Is Special and General Relativity less relevant now because it was first conceived in the 30's?
You're off by 3 and 2 decades respectively.
--Percy
Edited by Percy, : Spelling.

This message is a reply to:
 Message 80 by Hyroglyphx, posted 06-28-2009 11:31 PM Hyroglyphx has replied

Replies to this message:
 Message 98 by Hyroglyphx, posted 06-29-2009 9:44 AM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 102 of 291 (513524)
06-29-2009 1:45 PM
Reply to: Message 98 by Hyroglyphx
06-29-2009 9:44 AM


Re: Define life
Hyroglyphx writes:
I understand that you believe the line is so blurry, but surely you understand that you cannot successfully claim that life comes from non-life without first distinguishing between the two.
No one is failing to distinguish between life and non-life. You've offered a couple definitions of life, and we could quibble about the details, but clearly we all accept that life possesses certain qualities that distinguish it from non-life.
So no one is suggesting that it isn't possible to distinguish life from non-life. Clear?
What we're explaining to you is that in a gradual process of change in minute steps along the path from non-life to life, that the precise dividing line cannot be identified.
Here's an example of the ambiguity. Let's say that we agree that living matter is composed of cells that are delineated by cell membranes. We follow the development across time of a protocell that has no cell membrane. At a particular point of development we find that it has acquired a flimsy film around it that is fairly porous to material entering and leaving. After much reflection we decide that this is insufficient to be considered a cell membrane, and that therefore this proto-cell is not living.
At a later point in development we find that 10% of the film around the protocell has become an actual cell membrane. Is that sufficient for the protocell to be considered living? We decide not.
Later we find that 20% of the film is actual cell membrane, but we again decide that the protocell isn't living yet.
Later we find it has grown to 50% genuine cell membrane, and now 20% of scientists think it is living.
Later it grows to 75% genuine cell membrane, and 50% of scientists agree it is living.
And so on.
So at what point is the protocell considered alive?
You can't answer that question. And this is just one simple made-up scenario. The realities are far more complex with far more variables and huge numbers of permutations of ways for scientists to disagree.
This is why debating about the precise point where non-life became life is a pointless exercise. Origins of life researchers are far more interested in identifying possible pathways.
--Percy

This message is a reply to:
 Message 98 by Hyroglyphx, posted 06-29-2009 9:44 AM Hyroglyphx has replied

Replies to this message:
 Message 110 by Hyroglyphx, posted 06-30-2009 9:38 AM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 106 of 291 (513535)
06-29-2009 4:19 PM
Reply to: Message 103 by Hyroglyphx
06-29-2009 1:49 PM


Re: What is your point...?
Hyroglyphx writes:
My real issue??? I don't like dogmatic religious zealots who make a mockery of science and refuse to listen to reason and I don't like atheist hypocrites who are too enthralled by atheism itself that it's become a pseudo-religion complete with its own bible-thumping creation story. What's the difference between the two, honestly?
You've encountered neither of these caricatures in this thread.
Since when was We aren't entirely sure, but we are studying it an insufficient answer?
Have you considered the irony of asking this question after rejecting expressions of the ambiguity surrounding the dividing line between life and non-life?
Tentativity is a central concept in science, so when you complain, "But you haven't proved it," we can only agree with you, but not because theory is wrong, but because nothing in science is ever proved.
All that can be done is to offer evidence in support of tentative hypothesis and theory, but no amount of evidence will ever constitute proof. What you really mean to say is, "But you have insufficient evidence for your conclusions," and then we can get into a discussion of the evidence.
I'm getting the sense that your real issue is with methodological naturalism, which makes this thread even more off-topic for you.
--Percy

This message is a reply to:
 Message 103 by Hyroglyphx, posted 06-29-2009 1:49 PM Hyroglyphx has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 115 of 291 (513644)
06-30-2009 2:51 PM
Reply to: Message 110 by Hyroglyphx
06-30-2009 9:38 AM


Re: Define life
Hyroglyphx writes:
All I ever asked for was concession that abiogenesis still hasn't been proven and that living and non-living are clearly distinguished.
You already have that concession, I'll make it again: abiogenesis has not been proven. Everyone here agrees that abiogenesis has not been proven. All the evidence certainly points to abiogenesis, but it definitely has not been proven and never will, just like all else in science.
Science seeks only natural explanations. Anything perceptible by our senses, including by means of specialized instrumentation, is deemed to be part of the natural world. This means that phenomena for which we have no means of perception are not part of the natural world, and so are not amenable to scientific examination.
We have overwhelming evidence that everything that has ever happened in the universe has been due to natural causes. That this is an accurate observation explains why science's search for natural causes for everything has been so incredibly rewarding. And it's why when science seeks the explanation for anything it seeks only natural explanations. This is not something that is true only for the origin of life - it is true for all scientific investigation. If you object to seeking only natural causes for the origin of life, then you must object on the same grounds to seeking only natural causes for anything in science, whether its electricity, the structure of the atom, or the origin of stars. Any advocacy for unnatural causes lies outside the realm of science.
People like DR. Adequate here who feels it necessary to splatter his hubris all over the thread in a fit of superiority because, heaven forbid, I used the word "subduction" as opposed to "uplift."
You put your own love affair with hubris on public display first with all your wrongheaded statements made with utter confidence. You were as wrong about the nature of science as you were about subduction.
I'm concerned that you might be left thinking that things I don't comment upon were okay, so let let me comment on a few other things.
What we're explaining to you is that in a gradual process of change in minute steps along the path from non-life to life, that the precise dividing line cannot be identified.
I understand that, but have you not realized that this answer has been used as a catch-all answer for many unproven things in biology? "It's slow, so it's imperceptible."
The key issue isn't the speed of the process but that it's made up of extremely tiny steps, nearly a continuum.
Others have attempted to make a logical deduction, that since life is here now, it must have come from inorganic matter at some time, because there's nothing else they are willing to entertain. For them it's either nothing came to life or God. That's not an answer, that's not how science is conducted, and those don't have to be the only possibilities. Work from that basic inference, sure, but don't come to the conclusion until the conclusion is known empirically.
If it's amenable to scientific study then it happened naturally. You can entertain other possibilities if you like, but you can't call them scientific.
What gets under my skin is the surety with which some speak about things that have not been concluded, and worse yet, have already been proven false via empirical testing.
I haven't noticed anyone proposing explanations that "have already been proven false via empirical testing." Empirical testing is a means of applying scientific criteria to the study of phenomena, and one wonders how you plan to employ empirical testing of your "other possibilities" that exist outside nature.
--Percy

This message is a reply to:
 Message 110 by Hyroglyphx, posted 06-30-2009 9:38 AM Hyroglyphx has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 126 of 291 (513700)
07-01-2009 6:45 AM
Reply to: Message 125 by Dr Jack
07-01-2009 5:36 AM


Re: Instantaneous -- NOT ... Now define life.
Mr Jack writes:
Abiogenesis is a fact...
Nothing in science in known with certainty, not even direct observations. All we can do is use the scientific method to increase our confidence in what we know, and that confidence can never reach 100%. You can use the word fact if you like, but then to be consistent with the tentativity principle of science you have to qualify it a la Gould and say "In science 'fact' can only mean 'confirmed to such a degree that it would be perverse to withhold provisional assent.'"
Which leaves you saying the same thing everyone else is saying, except that in the meantime you've provided Hyroglyphx yet another thing to be confused about.
--Percy

This message is a reply to:
 Message 125 by Dr Jack, posted 07-01-2009 5:36 AM Dr Jack has replied

Replies to this message:
 Message 127 by Dr Jack, posted 07-01-2009 7:38 AM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 128 of 291 (513721)
07-01-2009 8:24 AM
Reply to: Message 127 by Dr Jack
07-01-2009 7:38 AM


Re: Science and facts
I don't think our views on the nature of science are much at odds, but about this:
Mr Jack writes:
I don't think the lack of complete certainty should scare us off using the word 'fact' in science where appropriate.
Hyroglyphx's complaint is about expressions of, in your words, "complete certainty," and even after this short exchange of messages between us I think it very likely that he'll interpret use of the word "fact" as an expression of the "complete certainty" he objects to as inappropriate to science.
Abiogenesis is an extremely obvious inference in the context of methodological naturalism where characterization as a fact would not be misinterpreted, but in the broader context of discussions like this that includes supernaturalism and even the Christian God then simple claims of "It's a fact" are bound to be misconstrued.
--Percy

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 Message 127 by Dr Jack, posted 07-01-2009 7:38 AM Dr Jack has not replied

Replies to this message:
 Message 137 by Perdition, posted 07-01-2009 1:23 PM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 139 of 291 (513760)
07-01-2009 1:36 PM
Reply to: Message 137 by Perdition
07-01-2009 1:23 PM


Re: Science and facts
I agree with Mr Jack, too. I objected not because I disagree with him, but because Hyroglyphx will inevitably misunderstand. We're already having a great deal of difficulty helping him to understand what we're trying to say, and asking him to grasp yet another subtle distinction is unlikely to help things.
Spelling things out more, not less, is the direction we should be going. Once we've gotten to the point where we're confident that Hyroglyphx won't respond to declarations like "Abiogenesis is a fact!" with "What gets under my skin is the surety with which some speak about things that have not been concluded," and "All I ever asked for was concession that abiogenesis still hasn't been proven," and so forth, then maybe we can start using more abbreviated forms of expression.
--Percy

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 Message 137 by Perdition, posted 07-01-2009 1:23 PM Perdition has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 140 of 291 (513763)
07-01-2009 1:40 PM
Reply to: Message 138 by Perdition
07-01-2009 1:28 PM


Re: Instantaneous -- NOT ... Now define life.
And to DevilsAdvocate, too...
Perdition writes:
What would you call a hunk of radioactive plutonium?
Isn't biological decay the clear context? And if DevilsAdvocate wasn't thinking along the same lines as you, then I have no idea what he's thinking of when he says rocks decay. That they weather, maybe? That's not biological, either.
Hyroglyphx doesn't have a valid point, but claiming that rocks decay in the same way as life doesn't seem like a valid rebuttal, either.
--Percy

This message is a reply to:
 Message 138 by Perdition, posted 07-01-2009 1:28 PM Perdition has replied

Replies to this message:
 Message 143 by Perdition, posted 07-01-2009 2:33 PM Percy has not replied
 Message 148 by DevilsAdvocate, posted 07-01-2009 6:00 PM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 142 of 291 (513772)
07-01-2009 2:21 PM
Reply to: Message 141 by Phage0070
07-01-2009 1:55 PM


Re: Instantaneous -- NOT ... Now define life.
I've tracked this down, and the "Rocks (inorganic) don't decay" claim comes from Message 130, where Hyroglyphx was agreeing with RAZD, and he clearly identified the context as being biological. DevilsAdvocate was taking the issue in a completely different direction.
It's interesting to learn that there are microbes that eat rocks, I'll bet many of us (including me) didn't know this, but I don't think this has anything to do with Hyroglyphx's line of argument in Message 130.
--Percy

This message is a reply to:
 Message 141 by Phage0070, posted 07-01-2009 1:55 PM Phage0070 has replied

Replies to this message:
 Message 145 by Phage0070, posted 07-01-2009 3:16 PM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 146 of 291 (513784)
07-01-2009 4:05 PM
Reply to: Message 145 by Phage0070
07-01-2009 3:16 PM


Re: Instantaneous -- NOT ... Now define life.
Phage0070 writes:
Then it seems appropriate that I did not reply to Message 130. I replied to Message 136 where it had everything to do with the line of argument.
Yes, I know, I already said that I'd figured out that it was DevilsAdvocate who initiated the digression. I'm just trying to minimize the digressions because of the ease with which Hyroglyphx is distracted from his main point about how confident we are that abiogenesis happened. I guess it makes sense that we'd have trouble maintaining a topic that's off-topic.
--Percy

This message is a reply to:
 Message 145 by Phage0070, posted 07-01-2009 3:16 PM Phage0070 has not replied

Replies to this message:
 Message 149 by DevilsAdvocate, posted 07-01-2009 6:02 PM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 150 of 291 (513819)
07-01-2009 6:29 PM
Reply to: Message 149 by DevilsAdvocate
07-01-2009 6:02 PM


Re: Instantaneous -- NOT ... Now define life.
I agree with you completely, and I'd love to see Hyroglyphx pressed on this exact point. The digression had to do with whether rocks "decay".
--Percy

This message is a reply to:
 Message 149 by DevilsAdvocate, posted 07-01-2009 6:02 PM DevilsAdvocate has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 152 of 291 (513835)
07-01-2009 10:06 PM
Reply to: Message 148 by DevilsAdvocate
07-01-2009 6:00 PM


Re: Instantaneous -- NOT ... Now define life.
Missed this reply earlier. Maybe I'm wrong about the decay of rocks being a good argument, but I didn't get it at first, and someone else thought you meant radioactive decay, plus you're not actually drawing equivalence but only an analogy between chemical decay and biological decay. Hyroglyphx was speaking in a biological context. I suppose you could argue that there's a sense in which the term "decay" can be applied to rocks, but it still isn't biological decay.
I don't know if anyone has said this already, but one argument I expected to see is that animals don't begin to decay until they no longer possess the quality of life, or something along those lines. It is formerly living organic matter that is now dead that is most subject to decay, not life.
But here's the problem. Hyroglyphx is one of those guys who is simultaneously wrong about so many things that it is very difficult staying on topic. But the point he keeps coming back to is how we know that abiogenesis happened, and I was hoping to maintain focus on that. But I'm not moderating in this thread, just suggesting, and we're already way, way off topic, so if you feel like you're right about rocks don't let me stop you.
--Percy

This message is a reply to:
 Message 148 by DevilsAdvocate, posted 07-01-2009 6:00 PM DevilsAdvocate has replied

Replies to this message:
 Message 153 by NosyNed, posted 07-01-2009 10:47 PM Percy has not replied
 Message 154 by Hyroglyphx, posted 07-01-2009 10:50 PM Percy has replied
 Message 157 by DevilsAdvocate, posted 07-02-2009 6:48 AM Percy has not replied
 Message 235 by Filameter, posted 07-07-2009 9:07 PM Percy has not replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 158 of 291 (513855)
07-02-2009 8:11 AM
Reply to: Message 154 by Hyroglyphx
07-01-2009 10:50 PM


Re: Instantaneous -- NOT ... Now define life.
Hi Hyroglyphx,
Sorry you didn't like the editorial comment, but let's examine it. Here's what I said:
Percy writes:
Hyroglyphx is one of those guys who is simultaneously wrong about so many things that it is very difficult staying on topic.
Here's one of the things you said in your reply:
Hyroglyphx writes:
There's no such thing as life...
This was the beginning of your paragraph summarizing what you feel are our ridiculous claims, so let's examine its accuracy. Has anyone here suggested that there's no such thing as life? I don't think so.
You next say:
Hyroglyphx writes:
...abiogenesis is an indisputable fact...
Only Mr Jack has said this, and I challenged it and put the whole "fact versus tentativity" thing in context.
Now of course that entire paragraph was written out of frustration, but other examples of errors from you abound in this thread. In your very first post you said this:
Hyroglyphx in Message 15 writes:
Abiogenesis has never been witnessed, experimentally replicated or proven in any way, just like God.
Your claim that experimental replication was required taught us that you don't understand the nature of scientific investigation, and your claim that proof was necessary taught us that you don't understand the nature of science. You continued making the "proof" mistake throughout the thread.
Later you said:
Hyroglyphyx in Message 59 writes:
It does though. If we are going over Louis Pasteur's experiment (or that one Italian scientist with the meat and flies experiment) then, no, they don't correlate. But what else are we talking about other than spontaneous generation? Life coming from non-life, spontaneously!
This revealed that you don't understand what Pasteur actually demonstrated with his experiments, and so also not the difference between abiogenesis and spontaneous generation.
Here's another:
Hyroglyphx in Message 61 writes:
The term abiogenesis is an antiquated theory disproven a long, long time ago.
You're a veritable font of misinformation.
Beyond your lack of understanding of science was the constant pokes you took at others, like these:
Hyroglyphx in Message 30 writes:
...we'll go back and forth for several rounds until I'm bored with repeating myself.
Hyroglyphx in Message 110 writes:
I'm now extremely bored of going around in circles.
You also made unwarranted assumptions about the other people here, as here:
Hyroglphyx in Message 45 writes:
What I'm trying to get people to realize is that their anti-religious, pro-science stance is often not too far off the mark than what they are against.
While we're all of course different individuals, by and large the science people here are not anti-religious. They simply believe that religions can't make scientific claims and not expect those claims to be subjected to scientific scrutiny. Critiquing ideas like the vapor canopy theory or the accelerated radioactive decay theory is not anti-religious, it is pro-science. Besides, since more scientists than not are a member of some religion, for your claim to have any substance would require that many religious people be anti-religious.
Then there's this:
Hyroglyphx in Message 61 writes:
I am referring to staunch evolutionists/creationists ruling out possibilities beforehand that philosophically conflict with their beliefs.
And this:
Hyroglyphx in Message 64 writes:
I'm talking about the ones who, just like creationists, refuse to even entertain a thought that slightly differs with their own ideologies. I'm talking about the assholes out there.
And this:
Hyroglyphx in Message 103 writes:
My real issue??? I don't like dogmatic religious zealots who make a mockery of science and refuse to listen to reason and I don't like atheist hypocrites who are too enthralled by atheism itself that it's become a pseudo-religion complete with its own bible-thumping creation story. What's the difference between the two, honestly?
So don't give us this holier-than-thou crap about how you've been unfairly picked on. You've been dishing out false criticism and sarcasm all through this thread. Develop a backbone and get back in here and start actually discussing things.
--Percy
Edited by Percy, : Typo.

This message is a reply to:
 Message 154 by Hyroglyphx, posted 07-01-2009 10:50 PM Hyroglyphx has replied

Replies to this message:
 Message 160 by Hyroglyphx, posted 07-02-2009 9:15 AM Percy has replied

  
Percy
Member
Posts: 22480
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.8


Message 161 of 291 (513882)
07-02-2009 9:42 AM
Reply to: Message 160 by Hyroglyphx
07-02-2009 9:15 AM


Re: Instantaneous -- NOT ... Now define life.
Hyroglyphx writes:
So please remind me again why this should continue?
Whether you continue or not must be your own choice. I've been involved in the creation/evolution debate for over 25 years, and what keeps me going most is concern over the threat to science education. Along the way I have learned a great deal, and the opportunity to learn also plays a role.
I take no sides until a sufficient answer is given.
You flatter yourself.
Often when people examine science it comes with ideological filters which gives them the answer they're looking for.
And denigrate others with criticism that applies as easily to yourself as anyone else.
The whole life/non-life thing is well beyond the realm of the absurd.
And cast yourself as the judge of what is reasonable.
My advice is to skip all the editorializing and personal commentary and just focus on the topic. If your arguments are sound then the outcome will take care of itself.
--Percy

This message is a reply to:
 Message 160 by Hyroglyphx, posted 07-02-2009 9:15 AM Hyroglyphx has not replied

  
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