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Author Topic:   Rodent speciation and Noah's Ark.
Buzsaw
Inactive Member


Message 16 of 31 (274522)
12-31-2005 10:32 PM
Reply to: Message 15 by Nuggin
12-31-2005 10:05 PM


So, is it your position that your hypothesis is on equal standing with Evolution? Better than evolution? Less than evolution?
My hypothesis on origins? I lurked in on your rat thread and conjectured a bit logically about your rat observation without researching rat data. That's all. There's more to my hypothesis of origins than what little I know about the rats. Take my 2cents worth on rats with a grain of salt, for what it's worth.

Gravity is God's glue that holds his universe together.

This message is a reply to:
 Message 15 by Nuggin, posted 12-31-2005 10:05 PM Nuggin has replied

Replies to this message:
 Message 17 by Nuggin, posted 12-31-2005 11:43 PM Buzsaw has replied

  
Nuggin
Member (Idle past 2511 days)
Posts: 2965
From: Los Angeles, CA USA
Joined: 08-09-2005


Message 17 of 31 (274529)
12-31-2005 11:43 PM
Reply to: Message 16 by Buzsaw
12-31-2005 10:32 PM


You aren't you...
Oh, Buzz, thought you were the one who launched the original post.
I see it was notsoblindfaith, my bad.

This message is a reply to:
 Message 16 by Buzsaw, posted 12-31-2005 10:32 PM Buzsaw has replied

Replies to this message:
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Yaro
Member (Idle past 6515 days)
Posts: 1797
Joined: 07-12-2003


Message 18 of 31 (275099)
01-02-2006 6:05 PM


*bump*
What, no takers?
No one interested in deffending rodent post-flood hyper-speciation?

  
pink sasquatch
Member (Idle past 6041 days)
Posts: 1567
Joined: 06-10-2004


Message 19 of 31 (275815)
01-04-2006 4:32 PM
Reply to: Message 1 by Yaro
12-31-2005 4:59 PM


a general reply: serious issues with evo arguments
There hasn't been a single argument made in this thread that refutes NotSoBlindFaith's basic point, that in the span of 4,500 years explosive speciation produced the diversity of rodentia that we see today from an original founder stock.
Additionally, the arguments that are made seem to reveal a strong lack of understanding of the predictions of the theory of evolution. I am also particularly disappointed to see that all of the evo arguments are restatements of fallacious creo arguments.
The claim has been made that evos don't call each other to task when such errors are made; while I do so my intent is not to offend, but rather to correct glaring errors and inform along the way:
Error 1: Speciation is regular and exponential:
Discreat_Label writes:
Well to be truthful a linear equation describing speciation in my opinion would be intelletually dishonest, mostly because populations don't follow linear rates of growth. But understandable to using a linear module because it is the easiest model to describe.
Yaro's commentary writes:
If the flood happened 3000 years ago, we are expecting a rate of 1 new rodent a year. But, as Discreat_Label pointed out, speciation in a population is non-linear so in truth an actual calculation would be exponential. This means you are expecting on the order of 467 new species a year!... We should litteraly be able to see rodents morphing before our very eyes.
(Since we don't directly observe evolution (morphing, ack!), it hasn't happened in a certain way. A standard creationist argument.)
Discreat_Label makes an enormous error here by horribly confusing the growth (via reproduction) of populations with the evolution (speciation) of populations. Growth of populations does, indeed, proceed exponentially until limited by resources essential for individual growth and reproduction (think bacteria in a nutrient-rich broth).
Evolution of new species follows a completely different path. Potential for speciation relies largely upon changes in the environment, it is in no way an automatic event given a set amount of time, which is what is truly suggested by the evo arguments here.
If anything, Discreat_Label got things backwards, that is, it is expected that speciation would occur much more rapidly immediately post-Flood as a massive array of open niches were made available, and slow down exponentially as those niches were filled and the species within them optimized.
Once this optimization occurs, the species are under "stabilizing", "normalizing" or "neutralizing selection"(1, 2), meaning that since they are optimized for their niche, selection will maintain the current optimal state until the environment changes and new selective pressures are encountered.
Extremely rapid speciation into suddenly-available niches has been called "explosive speciation", but a more general term that doesn't include the rate qualification is "adaptive radiation". The most famous example of an adaptive radiation is the Galapagos finches, which were founded by a single pair of finches (according to genetic analysis by the Grants) whose offspring eventually speciated as they specialized and colonized every available niche on the archipelago. Additionally, the Grants have shown that the finches continue to rapidly evolve (1, 2), even in seasonal timespans.
Another good example of explosive speciation into newly opened niches is the colonization of the Great Rift Lakes of East Africa, where over a thousand speciation events occurred in the past million years as a few river species adapted to the enormous number of niches in the newly formed lakes.
Error 2: Failure to breed beavers from mice refutes rapid speciation:
Yaro writes:
If NSBF's proposition is true, scientists should be able to breed rats, capybaras, or beavers out of a mouse or perhaps a squirrel.
Simply not true, and essentially a restatement of many off-base creationist arguments (as in: if evolution is correct, we should be able to produce humans through selective chimp breeding).
If my understanding is correct, NSBF never claimed that a beaver could evolve from a squirrel, but rather that they both rapidly evolved from a single common ancestor. I'm assuming that the pro-evolution side here would agree with the common ancestry.
When species (or breeds or lines) form under selection, the genetic information segregates into each species based on differences in selection. Once this happens, there is no way for one species to "recapture" the genetic information that ended up in another species, even though the two species shared a common ancestor and thus a single founding gene pool.
A comparable claim to your rodent claim above: in order to demonstrate that the dog breeds have recently diverged, we should be able to produce Saint Bernards from a chihuahua line through selective breeding. There is no reason to believe this would be possible, since many "Saint Bernard genes" were long ago selected out of the chihuahua gene pool line, as "chihuahua genes" were selectively fixed.
Remarkably, there is an enormous amount of phenotypic variability that can be selective bred from fairly homogeneous mouse stocks - for example, starting with one mouse stock, one group produced multiple lines with five-fold differences in body size and fat content. Drastic physiological differences have been selectively bred as well - it is this sort of physiologically selective breeding that many in the research community utilize to uncover the genetic basis of the function heart/kidney/liver/etc.
In any case, your squirrels-to-beavers claim would have no bearing on NSBF's argument, which involves the rate of speciation from a common ancestor.

Error 3: Sterile hybrids between closely-related species refute rapid evolution:
Coragyps writes:
Mus musculus domesticus, the house mouse, and Mus spretus, the Algerian mouse, make sterile hybrids if they're bred. But, as far as their genes indicate, they are more closely related than humans and chimps are. Does that raise any problems for the ante-Flood hyperspeciation? If these two aren't interfertile, how do we get beavers from mice in a couple thousand generations?
This was particularly painful to read. It is essentially a direct restatement of the Carico-speak that haunted by nightmares a couple of weeks ago: "apes breed apes, humans breed humans, if they can't interbreed, then how do we get humans from apes?"
Separate of this reoccurring fallacy that species with recent common ancestry should somehow be able to bred into one another, there is another issue here. The sterile hybrid example seems to be providing evidence more for NSBF's hypothesis then against it:
An example is given of two closely related rodent species that produce sterile hybrids, thus the two species maintain separate gene pools - they are reproductively isolated, they are separate species. Since they are closely related, this speciation has happened relatively recently.
In other words, to counter the contention that rodents have recently speciated, a reference was given describing recently speciated rodents.
In fact, mice appear exceptional in their rapid speciation - they are likely the fastest among the mammals. There has been a good deal of study on Robertsonian translocations leading to speciation in Alpine and other mice - in this form of speciation, based on sudden karyotype changes, speciation occurs in a few generations or doesn't occur at all. Such rapid, karyotype-driven speciation likely occurs in other rodents as well though it hasn't been discovered yet (mice are the most genetically analyzed mammal, so it is no surprise that the mechanism was elucidated in species of mice).

Error 4: Evolutionary stasis in one species in an adaptive radiation is predictive of trends in the radiation as a whole:
Nuggin writes:
Why haven't the rats changed in 700 years? Did they some how stabalize after the Flood?
Are these the same rats that the Chinese have in their calendar (ie the year of the rat)? That dates to 2500+ years ago. That means that Noah's son or grandson had to start the Chinese calendar
Kind of brings to mind the fallacious creationist argument, "the coelacanth hasn't changed in several million years, therefore evolution doesn't occur in a certain way".
The (implied) statement again suggests that speciation/evolution is a constant, regular event for each species - which is simply not the case. Evolution in all species "stabilizes" once optimization to the niche is reached (see comments on normalizing selection above).
Importantly, simply from evolutionary stasis in rats we can make no comment on the concurrent rate of evolution/speciation in any other rodent species. Furthermore, if the diversity of rodents is the result of the sort of explosive adaptive radiation that NSBF suggests, then we would expect the bulk of evolution to occur early in the time frame, not later - we should expect stasis of the kind pointed out.
By the way, it is likely that the Chinese rat was a different species/subspecies (maybe R. tanezumi) than that involved in the European Black Plague (probably R. norvegicus and/or R. rattus). Also, given the Flood timeline, these would have had 2000 years on the front end of the adaptive radiation to speciate prior to your date for the Chinese calendar.
Interestingly, rattus and tanezumi are morphologically indistinguishable, and up until recently were considered one species. Karyotype differences distinguish the species - karyotype differences that can be a hallmark of a sudden/rapid speciation event.
Overall Error: A bunch of strawman arguments and arguments from incredulity:
Yaro writes:
These things simply could not have arisen from a squirrel-like ancestor some 3000 years ago... If we can't do it in the lab, why should we expect that to be happening in the wild? ...
It seems both sides of the argument agree that rodentia did evolve from a common ancestor, it's just the speed of the evolution which is in dispute. The only rate-of-evolution arguments that have been made are based on disbelief, with no evidence or substantiation.

This message is a reply to:
 Message 1 by Yaro, posted 12-31-2005 4:59 PM Yaro has replied

Replies to this message:
 Message 20 by Yaro, posted 01-04-2006 4:52 PM pink sasquatch has replied
 Message 21 by nwr, posted 01-04-2006 5:07 PM pink sasquatch has not replied
 Message 26 by Coragyps, posted 01-04-2006 9:14 PM pink sasquatch has not replied

  
Yaro
Member (Idle past 6515 days)
Posts: 1797
Joined: 07-12-2003


Message 20 of 31 (275828)
01-04-2006 4:52 PM
Reply to: Message 19 by pink sasquatch
01-04-2006 4:32 PM


Re: a general reply: serious issues with evo arguments
Error 2: Failure to breed beavers from mice refutes rapid speciation:
I have to be picky on this one. I made an unclear statement. I did attempt to clarafy it in the origional post by saying:
quote:
Mind you, I don't mean an actual capybara, but rather a capybara like creature.
Going on the infference that through selective breading you could generate a semi-aquatic mouse etc. Not that an actual beaver as we know it would arise. This was my fault as I was unclear in the initial statement.
This message has been edited by Yaro, 01-04-2006 04:52 PM

This message is a reply to:
 Message 19 by pink sasquatch, posted 01-04-2006 4:32 PM pink sasquatch has replied

Replies to this message:
 Message 22 by pink sasquatch, posted 01-04-2006 6:23 PM Yaro has replied

  
nwr
Member
Posts: 6409
From: Geneva, Illinois
Joined: 08-08-2005
Member Rating: 5.3


Message 21 of 31 (275831)
01-04-2006 5:07 PM
Reply to: Message 19 by pink sasquatch
01-04-2006 4:32 PM


Re: a general reply: serious issues with evo arguments
Great post, pink sasquatch. You can treat this as a seconding of your POTM nomination.
Let me offer a mea culpa. I saw some of the problems you mention, yet did not post on them. In retrospect, I should have.

This message is a reply to:
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pink sasquatch
Member (Idle past 6041 days)
Posts: 1567
Joined: 06-10-2004


Message 22 of 31 (275855)
01-04-2006 6:23 PM
Reply to: Message 20 by Yaro
01-04-2006 4:52 PM


Re: a general reply: serious issues with evo arguments
Yaro writes:
Going on the infference that through selective breading you could generate a semi-aquatic mouse etc. Not that an actual beaver as we know it would arise. This was my fault as I was unclear in the initial statement.
Thanks for the clarification, but it does nothing to change what I see as an error; to reword my previous statement:
pink writes:
Error: Failure to breed a semi-aquatic mouse from the house mouse refutes rapid speciation.
Again, the genetic information can be very different between two species, even if they recently diverged from a common ancestor, because of differential segregation/maintenance of the genes that were inherited from that common ancestor. In the case of rodents, "aquatic rodent genes" from a common founding gene pool may have been lost in the house mouse lineage and maintained in the beaver lineage. The house mouse species simply doesn't carry the genetic potential to produce semi-aquatic phenotypes, so there is no reason to expect selective breeding to produce a semi-aquatic mouse. Similarly, there is no reason to expect selective breeding of Chihuahuas to produce a Saint Bernard - the Chihuahuas have lost the genetic potential to produce Saint Bernard phenotypes.
And again - it isn't clear to me how this line of argument pertains to the rate of rodent speciation.

This message is a reply to:
 Message 20 by Yaro, posted 01-04-2006 4:52 PM Yaro has replied

Replies to this message:
 Message 23 by Yaro, posted 01-04-2006 6:33 PM pink sasquatch has replied

  
Yaro
Member (Idle past 6515 days)
Posts: 1797
Joined: 07-12-2003


Message 23 of 31 (275863)
01-04-2006 6:33 PM
Reply to: Message 22 by pink sasquatch
01-04-2006 6:23 PM


Re: a general reply: serious issues with evo arguments
In the case of rodents, "aquatic rodent genes" from a common founding gene pool may have been lost in the house mouse lineage and maintained in the beaver lineage. The house mouse species simply doesn't carry the genetic potential to produce semi-aquatic phenotypes, so there is no reason to expect selective breeding to produce a semi-aquatic mouse. Similarly, there is no reason to expect selective breeding of Chihuahuas to produce a Saint Bernard - the Chihuahuas have lost the genetic potential to produce Saint Bernard phenotypes.
Hmmm... this is a problem I have had with creo. arguments in the past. And maybe you can correct me on this. Is there such a thing as "genetic potential"?
Can we state, with certainty, that we couldn't breed Chihuahuas into larger and larger dogs?
And again - it isn't clear to me how this line of argument pertains to the rate of rodent speciation.
I think this is the larger issue, and it's the root of where my argument misses the mark. It assumes a constant rate of evolution which of course is incorrect.

This message is a reply to:
 Message 22 by pink sasquatch, posted 01-04-2006 6:23 PM pink sasquatch has replied

Replies to this message:
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pink sasquatch
Member (Idle past 6041 days)
Posts: 1567
Joined: 06-10-2004


Message 24 of 31 (275874)
01-04-2006 7:21 PM
Reply to: Message 23 by Yaro
01-04-2006 6:33 PM


Re: a general reply: serious issues with evo arguments
Hmmm... this is a problem I have had with creo. arguments in the past. And maybe you can correct me on this. Is there such a thing as "genetic potential"?
You're right - I should be careful about throwing out nebulous terms like "genetic potential"; my intent when I used it was to refer to the ability (potential) of a population to produce a particular phenotype through combination of various (genetic) alleles already present in the population.
An example from nature of what I think of as genetic potential: Stickleback fish have armored plating to various degrees in different populations. Populations in the open ocean have lots of plates, while populations in freshwater lakes have few plates - this is due to different selective pressures in the two environments. However, it was recently shown that some individuals in the ocean populations, even though almost universally high-plate in phenotype, carry alleles that can produce few-plate phenotypes in certain combinations. The hypothesis is that when the ocean populations are given the opportunity to colonize lakes, a subset of those populations already carry the genes to produce an optimal lake phenotype; that is, a "genetic potential" to produce the lake phenotype.
It's the "already present" part of my genetic potential definition that is important when thinking about what can be produced in short term artificial selection experiments - artificial selection generally acts on the genetic variation already present in a population, since the necessary time is not available for mutation to play a large role in the production of new genes/alleles. Many research laboratories induce mutations by various means to compensate for too few generations, thus producing increased genetic/phenotypic variability.
However, the longer and larger the "artificial selection experiment", the more mutation plays a role in genetic variability: Dogs have been selectively bred long enough in large number and variety, and have just begun to be genetically analyzed sufficiently to show that mutation has contributed to their phenotypic change, particularly via genes that are prone to mutation, or "hypermutable".
Can we state, with certainty, that we couldn't breed Chihuahuas into larger and larger dogs?
I'm sure that selective breeding of purebred Chihuahuas would produce larger and larger dogs, up to a point - a point that would still be much smaller than the smallest Saint Bernard. This is similar to the Hill reference I gave in my previous post regarding selective breeding of large and small mice - in the artificial selection experiments, there is a clear upper and lower limit to the range of body sizes that can produced. However, mutation of just a single gene can drastically expand this range. Indeed, the first transgenic mouse was created in 1982 when scientists put a rat growth hormone gene into mice - turning that gene on produced enormous mice. The "engineered mutation" experiment demonstrates how manipulation/mutation of a single gene can drastically change the phenotypic range of a characteristic.
In other words, if that line of Chihuahuas experienced a (non-lethal) mutation that doubled their production of growth hormone, the upward range of body size in that population would likely experience a sudden expansion.

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nwr
Member
Posts: 6409
From: Geneva, Illinois
Joined: 08-08-2005
Member Rating: 5.3


Message 25 of 31 (275883)
01-04-2006 7:48 PM
Reply to: Message 23 by Yaro
01-04-2006 6:33 PM


Re: a general reply: serious issues with evo arguments
Is there such a thing as "genetic potential"?
Let me comment on what I see as the problem. And I won't use "genetic potential" since I'm a bit hazy as to what that means.
The house mouse is specialized for a particular niche. The beaver is specialized for a rather different niche.
Normally when we talk of mouse and beaver having a common ancestor, we assume that ancestor is relatively less specialized, and descendents just specialized in two or more different ways. It might be a lot more difficult for a house mouse to evolve in ways that causes it to lose its current specialization, then evolve a different specialization.
Going back to the Noah's flood scenario, with rapid evolution, the assumption could be that the rodents on the ark were relatively unspecialized, so could more rapidly evolve into a number of more specialized niches.
I don't expect it could possibly happen in the time available, and pink sasquatch probably doesn't either. However, the point remains that the evolution problem that needed to be solved might be significantly simpler than the one you used for comparison.

This message is a reply to:
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Coragyps
Member (Idle past 753 days)
Posts: 5553
From: Snyder, Texas, USA
Joined: 11-12-2002


Message 26 of 31 (275898)
01-04-2006 9:14 PM
Reply to: Message 19 by pink sasquatch
01-04-2006 4:32 PM


Re: a general reply: serious issues with evo arguments
PS, I humbly submit to this well-earned thrashing from you. Had I thought before I typed......
I'll pay attention next time.

This message is a reply to:
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Buzsaw
Inactive Member


Message 27 of 31 (275905)
01-04-2006 9:42 PM
Reply to: Message 17 by Nuggin
12-31-2005 11:43 PM


You had me wondering
Nuggin writes:
Oh, Buzz, thought you were the one who launched the original post.
I see it was notsoblindfaith, my bad.
No problem, Nuggin. You had me wondering if someone had spiked my glass of after dinner Pink Niagara.

Gravity is God's glue that holds his universe together.

This message is a reply to:
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NosyNed
Member
Posts: 9003
From: Canada
Joined: 04-04-2003


Message 28 of 31 (276680)
01-07-2006 1:45 PM


bump NSBF still not really answered
It appears to me that, as Crash pointed out, NSBF has still not been answered very well.

Replies to this message:
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Yaro
Member (Idle past 6515 days)
Posts: 1797
Joined: 07-12-2003


Message 29 of 31 (276773)
01-07-2006 7:19 PM
Reply to: Message 28 by NosyNed
01-07-2006 1:45 PM


Re: bump NSBF still not really answered
Pink pointed it out. Not crash
I am working on a revision, I have just been very busy the last couple of days. If anyone else want's to put forward a better argument, be my guest.

This message is a reply to:
 Message 28 by NosyNed, posted 01-07-2006 1:45 PM NosyNed has not replied

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RAZD
Member (Idle past 1424 days)
Posts: 20714
From: the other end of the sidewalk
Joined: 03-14-2004


Message 30 of 31 (277254)
01-08-2006 6:06 PM
Reply to: Message 29 by Yaro
01-07-2006 7:19 PM


Re: bump NSBF still not really answered
The problem you are dealing with is the rate of speciation after an extinction event -- something that is really not well delineated in the fossil record or in recent experience.
The closest I can think of is the fossil record of the foraminifera after the {yucatan\asteroid} event, where rapid speciation (compared to other times) filled niches that were left vacant by the event.
See Evolution
at sea, complete fossil record from the ocean upholds Darwin's gradualism theories (click)
about 3/4's down the page:
It may be in what the foram record suggests about how life copes with mass annihilation that eventually draws the most attention to the FSU paleontologists' work. ...
One of the last great extinctions occurred roughly 66 million years ago and, ... the event proved to be the dinosaurs' coup de grace, and so wiped out a good portion of the marine life--including almost all species of planktonic forams.
The ancient record of foram evolution reveals that the story of recovery after extinction is indeed busy and colorful. "What we've found suggests that the rate of speciation increases dramatically in a biological vacuum," says Parker. "After the Cretaceous extinction, the few surviving foram species rapidly evolved into new species, and for the first time we're able to see just how this happens, and how fast."
As the available niches fill up with these new creatures, the speciation rates slow down, and the pressure from competition between species appears to bear down in earnest. The extinction rate then rises accordingly.
What we don't know (and neither do creationists) is what the level of "experimentation" would involve on more complex creatures, and whether such would result in what is normally considered (especially by creationists) as "macro"evolution in the original diversifications as they matured into more modern species: extrapolating backwards from current rates would you get a common "rodentia" ancestor or one at a higher taxonomic (arbitrary human distinction) level?
Then the question becomes whether that rate of evolution is feasible, or do you get a melt-down as you approach T=0.
Just my thoughts.
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This message is a reply to:
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