quote:
Originally posted by peter borger:
Dear John,
Thanks for you response, but you are wrong.
According to the authors: Almost none of the amino acid positions may be under strong selective constraint, because the fraction of polymorphic sites in the intron is comparable to the fraction of polymorphic sites in the coding region. In addition, they say that a comparison between fixed and polymorphic sites between the two species shows also no significant deviation from the assumption of a neutral evolution in this region.
Thus, this gene is not under selective constraint and has not been selected for during millions of years. Unless you would like to assume neutral selection. I have posted a couple of e-mails to evolutionary theorist to figure out what they exacly mean by neutral selection. None of them responded, demonstrating the current problem in NDT.
If you have a solution, please let me know.
Peter
It seems that this thread has been picked up by Percipient who is doing a better job of it than I could, but two things came to mind after reading your last reply to me.
The first is that this gene may be linked to other genes which are under selective pressure. One of the authors, Tautz, proposes this possibility in another paper. He refers to it as a weak selection.
The second is that even assuming this gene has not been under selective pressure and has not mutated, you still have not proven your point. There is no minimum random mutation rate per gene. You have one gene in one organism, this is one case in many. You could be looking at a fluke. A run of luck at the roulette wheel does not prove the odds have changed.
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