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Author Topic:   Evolving New Information
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 312 of 458 (523161)
09-08-2009 5:22 PM
Reply to: Message 298 by greyseal
09-05-2009 3:24 AM


Re: and yet you go there
Can't you see that that's an argument from incredulity and nothing else? Can't you see that lack of knowledge isn't evidence of anything? Can't you see that taking pieces out of a working system is in no way analogous to proving that it can't have evolved from a different, related system?
All it is is "god of the gaps".
Can't you see that it is not only "god of the gaps", it is also "evolution of the gaps" or an "argument from ignorance of natural causes".
In other words, I will almost meet you half way based on the limited amount of data behind this and there is no known way to explain it relative to current mainstream science. If I didn't think these systems didn't require foresight and coherence then I would agree with you.

This message is a reply to:
 Message 298 by greyseal, posted 09-05-2009 3:24 AM greyseal has not replied

Replies to this message:
 Message 324 by Percy, posted 09-09-2009 7:02 AM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 313 of 458 (523167)
09-08-2009 5:43 PM
Reply to: Message 299 by PaulK
09-05-2009 3:26 AM


Re: and yet you go there (yes I do)
Behe's view in particular is so close to that of modern evolutionary science that the best arguments for Darwinism would not be expected to be major blows against it.
I would expect scientists who are proponents of ID to do research. This is because it is obvious to me natural laws and natural causes are operating all of the time. But you are probably using Creationism as a reference for comparison and that is why you see it as "so close".
And worse, ignoring criticisms that have already been brought to your attention (which apparently you choose to blame on your opponents).
I would really like to know what they were if I have not refuted them.
Of course, even your modified version - while better - is not true because ID is so amorphous.
There may be an assumption here that we cannot figure out the way an intelligent designer designed things.
Because if you did ID would be shown to be an anti-scientific propaganda movement dedicated to changing the U.S. educational system to favour the religious beliefs of the ID supporters.
I believe that Wounded King and I mutally agreed when you take this outside of science into atheism or ID it then falls into the realm of philosophy. I, of course, do not believe Richard Dawkin's arguments are better.
We have the attempts to paint support for ID as rising - your own for instance (you didn't weigh the evidence there !).
When Darwin's theory became well known 150 years ago, archaeopteryx was found two years later. This I believe was no accident. The whole paradigm permeated its way into the way societies thought and how governments ran. Trends form and their effects are felt. Look at the stock market trend in the 1990s and the real estate trend and the current trend in gold. No single explanation can be found for the reason why they were formed. All of these trends were driven by multiple reasons.

This message is a reply to:
 Message 299 by PaulK, posted 09-05-2009 3:26 AM PaulK has replied

Replies to this message:
 Message 316 by PaulK, posted 09-08-2009 6:21 PM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 314 of 458 (523169)
09-08-2009 5:47 PM
Reply to: Message 300 by greyseal
09-05-2009 3:35 AM


Re: What is information?
what's natural genetic engineering?
Conduct a google search with these terms - "James Shapiro natural genetic engineering" and click the fifth link down.

This message is a reply to:
 Message 300 by greyseal, posted 09-05-2009 3:35 AM greyseal has not replied

Replies to this message:
 Message 321 by RAZD, posted 09-08-2009 9:17 PM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 315 of 458 (523172)
09-08-2009 5:59 PM
Reply to: Message 301 by jacortina
09-05-2009 9:33 AM


Re: and yet you go there (yes I do)
Then what is the positive evidence FOR Intelligent Design?
It can be found anywhere through the microscope to the telecope. The fine-tuning of all of these things:
1. the cell 2. the terrestrial environment of the earth (things such as life supporting cycles and radioactive isotopes) and our life supporting moon. 3. the solar system and its position in the galaxy which also happens to be a galaxy better suited to support life. 4. fine-tuning of physics of our universe such as gravity and nuclear force. Here is an example I found from physics:
Mathematician Roger Penrose (Penrose 1981) has estimated that the margin of error permitted here was less than 1 in 10 to the 10 to the 123rd power (that is, 1 followed by 10 to the 123rd power zeros, more zeros than there are particles in the universe!)
'A designer did it' is an attribution, not an explanation. It's exactly equivalent to me coming home to find a broken vase and having my child say 'a friend did it'. That EXPLAINS nothing about HOW the vase got broken.
You wouldn't accept that throwing the broken pieces of a vase into a bag and shaking it would create a new vase. You would demand an explanation other than that one.
I don't see any reason why science cannot investigate astrology. It can investigate anything it wants.
Has anything as specific as these vague characteristics been determined (or even conjectured) for how design works?
Let me see. The designer would probably have arranged the amino acids in the first proteins (assuming proteins came before DNA). There are left handed and right handed amino acids. The designer probably used only left handed amino acids and arranged them in specific ways and assembled at least thousands of them together specified arrangements to the resulting protein fit together and worked together coherently.
Edited by traderdrew, : No reason given.
Edited by traderdrew, : No reason given.

This message is a reply to:
 Message 301 by jacortina, posted 09-05-2009 9:33 AM jacortina has replied

Replies to this message:
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 Message 320 by jacortina, posted 09-08-2009 7:54 PM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 317 of 458 (523188)
09-08-2009 6:49 PM
Reply to: Message 316 by PaulK
09-08-2009 6:21 PM


Re: and yet you go there (yes I do)
Then you need to offer a real explanation for why there is so little published ID research. And why the ID movement couldn't find anyone to take up the offer of a grant from the Templeton Foundation.
I just researched this on the Discovery Institute site. I saw that a grant from the Templeton Foundation was given to the authors of the "Priveleged Planet".
I can point out the fact that we have not one demonstrated example of Dembski's CSI in biology - yet you still try to produce "CSI" as evidence for ID.
Living organisms are distinguished by their specified complexity. Crystals fail to qualify as living because they lack complexity; mixtures of random polymers fail to qualify because they lack specificity. [ L.E. Orgel, 1973. The Origins of Life. New York: John Wiley, p. 189. Emphases added.]
I said it before, you see no CSI and you hear no CSI. I have ased this question before, if it is not CSI, then what is it then?
Gotta run

This message is a reply to:
 Message 316 by PaulK, posted 09-08-2009 6:21 PM PaulK has replied

Replies to this message:
 Message 319 by mark24, posted 09-08-2009 7:14 PM traderdrew has not replied
 Message 322 by PaulK, posted 09-09-2009 2:00 AM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 326 of 458 (523291)
09-09-2009 11:21 AM
Reply to: Message 320 by jacortina
09-08-2009 7:54 PM


Re: and yet you go there (yes I do)
In fact, a thorough statistical analysis of all known universes shows that the probability of a universe existing with the exact properties we see in this one is ... unity. Exactly 1/1.
If you can prove this then I will leave this site forever. (((Documentation please.)))

This message is a reply to:
 Message 320 by jacortina, posted 09-08-2009 7:54 PM jacortina has replied

Replies to this message:
 Message 327 by PaulK, posted 09-09-2009 11:25 AM traderdrew has not replied
 Message 329 by jacortina, posted 09-09-2009 11:36 AM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 328 of 458 (523293)
09-09-2009 11:26 AM
Reply to: Message 321 by RAZD
09-08-2009 9:17 PM


Re: back up the reference bus -- don't you learn?
You didn't find it. Here it is.
James A. Shapiro
You just got lambasted for posting information from a person that told falsehoods, and it appears you have not learned anything from it.
If James Shapiro told falsehoods then I suggest you provide some supporting evidence from a scientific journal.

This message is a reply to:
 Message 321 by RAZD, posted 09-08-2009 9:17 PM RAZD has replied

Replies to this message:
 Message 337 by RAZD, posted 09-09-2009 10:03 PM traderdrew has not replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 330 of 458 (523297)
09-09-2009 11:51 AM
Reply to: Message 322 by PaulK
09-09-2009 2:00 AM


Re: and yet you go there (yes I do)
If you are going to accuse me of willful blindness, just for understanding an ID argument and pointing out it's flaws - which is what you've just done - you throw out any pretence of honestly seeking the truth. You just want to support ID and the truth can go hang.
I have tried to find evidence against what I believe. I found this in another link on this forum:
In the rebuttal posted above (through the IIDB debate site) it states that protein SEQUENCES can differ by 80% while still holding the same conformational shape and the same enzymatic properties.
I cannot find any good evidence for the above quote on the net. Claims don't cut it and there are a lot of claims on this forum. In fact, I have found evidence that contradicts the above on google searches on scientific papers.
CSI in DNA??
The nucleotides are arranged in specified sequences are they not?
The nucleotides are information that is ultimately trascribed into amino acids which then form proteins. Is this not true.
I guess Francis Crick's sequence hypothesis has been proven false. Has it???
I would not consider "Specified" as a subjective term. I would consider "complex" as subject to interpretation. However, I would definitely draw the line where proteins have to bind to proteins in more than one specific way at specific places. Each protein is made to fit with other proteins but each protein is assembled independently from each other. The coherence required would call for "complex" information.
Do the proteins somehow morph into each other during their formations?
I'm tired of arguing with walls. I'm begging you to shut me up.

This message is a reply to:
 Message 322 by PaulK, posted 09-09-2009 2:00 AM PaulK has replied

Replies to this message:
 Message 332 by PaulK, posted 09-09-2009 12:02 PM traderdrew has replied
 Message 335 by Wounded King, posted 09-09-2009 12:40 PM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 331 of 458 (523299)
09-09-2009 11:54 AM
Reply to: Message 324 by Percy
09-09-2009 7:02 AM


Re: and yet you go there
I will agree with you.

This message is a reply to:
 Message 324 by Percy, posted 09-09-2009 7:02 AM Percy has seen this message but not replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 333 of 458 (523305)
09-09-2009 12:10 PM
Reply to: Message 329 by jacortina
09-09-2009 11:36 AM


Re: and yet you go there (yes I do)
The guy above you says that I should think about it and know that it is true as if what is going on in our heads represents reality. I just tried these google terms. It hasn't been the first time I have looked for criticisms of Robin Collins.
"dials for adjusting laws of physics"
I just found this in wikipedia. Fine-tuned universe - Wikipedia
There are fine tuning arguments that are naturalistic [10].
You cannot disprove or dismiss the fine-tuning theories with good scientific research. The anthropic principles are the best arguments against it that I can think of. I'm calling your bluff.

This message is a reply to:
 Message 329 by jacortina, posted 09-09-2009 11:36 AM jacortina has not replied

Replies to this message:
 Message 338 by Rrhain, posted 09-10-2009 2:58 AM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 334 of 458 (523307)
09-09-2009 12:14 PM
Reply to: Message 332 by PaulK
09-09-2009 12:02 PM


Re: and yet you go there (yes I do)
But your post clearly shows that you have not done so and that you are ignoring facts that have been brought to your attention. None of your post addresses Dembski's definition of CSI.
I have had enough. You all win. I'm sorry that I appeared to be nasty but I was just trying to challenge you to provide me with something with more substance.
I will go away but I will lurk to see if any of you can provide any real documentation.

This message is a reply to:
 Message 332 by PaulK, posted 09-09-2009 12:02 PM PaulK has replied

Replies to this message:
 Message 336 by PaulK, posted 09-09-2009 2:11 PM traderdrew has not replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 345 of 458 (523601)
09-11-2009 11:35 AM
Reply to: Message 335 by Wounded King
09-09-2009 12:40 PM


Re: and yet you go there (yes I do)
It seems strange to try and challenge us on our claims based on a claim that no one on this site made.
In the rebuttal posted above (through the IIDB debate site) it states that protein SEQUENCES can differ by 80% while still holding the same conformational shape and the same enzymatic properties.
I did find the above quote on this website but not in this section. See message 9 in here:
EvC Forum: Meyer's Hopeless Monster
I also found out that different enzymes (proteins) can perform the same functions. Such as the case in evolving an enzyme that can hydrolyze nylon. Different species of bacteria are capable of it. There is more than one type of enzyme that can do this. Although it is one thing to have different tools that can perform a similar or the same function and another thing for similar but different sequences of proteins to determine the same structures.
I found a link the other day, where it basically stated a 50% sequence differences also showed significant differences between protein shapes. I didn't bookmark it and I can't find it right now. I found a quote from another link:
The present work shows that folding rates for proteins of all kinds (as well as short polypeptides) are well estimated from secondary structure predictions based on the amino acid sequences and the lengths of these sequences.
I thought I couldn't post bare links or links that I don't articulate thoughts from (I'm not sure where the moderators draw the lines) but if you want to find the source, just cut and paste the quote into a google search.
No its not true, it is transcribed in to mRNA which is then translated into amino acids, in some cases.
I think we both left out details in the process. You didn't mention the polymerase and the ribosome.
we'd rather you followed one line of argument to some sort of conclusion instead of batting around all over the place. And ideally that you backed your claims up with reference to scientific research rather than popular books. James Shapiro is the right sort of direction to be going Shapiro's work is very interesting, but unfortunately for you it doesn't provide evidence for ID.
I think Shapiro's work is metaphysically neutral so far in the debate and the same with symbiogenesis. Were did all of the engineering in the cell come from? That is another subject.
Edited by traderdrew, : No reason given.

This message is a reply to:
 Message 335 by Wounded King, posted 09-09-2009 12:40 PM Wounded King has replied

Replies to this message:
 Message 347 by Wounded King, posted 09-11-2009 1:31 PM traderdrew has replied
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traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 346 of 458 (523606)
09-11-2009 11:57 AM
Reply to: Message 338 by Rrhain
09-10-2009 2:58 AM


So unless you can show that there is a second universe out there, then we are left with only the universe we have. And thus, the probability of a universe existing with precisely the characteristics of our current universe is exactly 1.
Fine... I have no problem dealing with a single three dimensional universe or a multiuniverse around here.
I do not believe that any scientist who examined the evidence would fail to draw the inference that the laws of nuclear physics have been deliberately designed with regard to the consequences they produce inside the stars.- Fred Hoyle
Fred Hoyle and I differ on lots of questions, but on this we agree: a common-sense and satisfying interpretation of our world suggests the designing hand of a superintelligence. Impressive as the evidences of design in the astrophysical world may be, however, I personally find even more remarkable those from the biological realm.- Dr. Owen Gingerich
Need I say more? Now, how can we argue with these two scientists???
Some of you can continue to bury your heads in the sand or spin some sort of protective cocoons around your psyches in order to shield yourselves from the existence of a creator. I however do not believe that shielding yourselves from the realities of life is a good way to deal with it and I don't think this is good science either.
Enough said
Edited by traderdrew, : No reason given.
Edited by traderdrew, : No reason given.

This message is a reply to:
 Message 338 by Rrhain, posted 09-10-2009 2:58 AM Rrhain has replied

Replies to this message:
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traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 368 of 458 (525105)
09-21-2009 4:34 PM
Reply to: Message 347 by Wounded King
09-11-2009 1:31 PM


Re: Persistent twittery
I have been busy lately on a totally different project so I haven't had the time to respond. I don't mean to sound sarcastic, once again I haven't found any good evidence to disprove ID except maybe common descent. I have mined various quotes around here and I have found answers to them. I thought of an answer to it that the intelligent designer isn't concerned with linear time the way we are concerned with it. Also, there might be some good reasons for an old Earth such as petroleum production. And also, my hypothesis of Assemblism which basically says biological life forms have been built and evolved (evolved through intelligent engineering) through natural laws with a precision that we are probably currently incapable of.
An example of another brief counterpoint from mining quotes from this thread is: Saying that the physics of the universe somehow fits together through some sort of random dumb luck and it just happens to support life as we know it isn't a scientific explanation. At best, there is evidence for natural processes but in my opinion design wins as the better explanation.
Do you agree that there is in fact also evidence to substantiate the claim?
No, I have not found evidence to support that quote in message 9 in the Meyer thread. I have found evidence that contradicted it. I also found quotes saying that what determines the 3D structure of proteins in controversial in itself. But what would determine the folding structures if it wasn't precise information. I also recall reading that proteins can fold and form in other ways the ways they are supposed to but that has lead to malfunctions and diseases.
Are you claiming that the MotA from one of those bacteria is in fact the product of convergent evolution from an entirely unrelated gene rather than simply a member of the same lineage with a high proportion of sequence divergence?
I am not claiming this. I guess you can make a case for convergent evolution. I will refesh your memory quoting from Sean Carroll. The most stunning discovery of Evo Devo [that similar genes shapes dissimilar animals]... was entirely unanticipated.
For example certain control proteins found in wings are also found in crustacean gills. As pointed out by Behe in "The Edge of Evolution", this says absolutely nothing about how gills could be converted to wings by a Darwinian process. So convergent evolution would be or remain a possible pathway for exploration.
I don't quite know what the point of this paragraph is
I was referring to the 3D stuctures of proteins.
It is quite possible for similar but not identical amino acid substituttions to allow similar conformations, so there is no reason why a non-identical 2ary structure can't give rise to a similar functional fold.
I have to agree. This is most likely a truth.
No it isn't, it is exactly the subject Shapiro's work addresses and the answer is that much of the engineering comes from transposable elements in the DNA and mechanisms which promote genetic re-arrangement as a response to certain environmental cues or in specific cell lineages, i.e. the immune system in mammals.
The thinking behind this is based on what Behe and Meyer have stated. In a conference at the Heritage Foundation Stephen Meyer briefly spoke about Shapiro and he told us Shapiro rarely thinks about where the engineering came from. Also, Behe states the more complex the biochemical machinery is the more hurdles there is for Darwinism and the more we discover how complex all of it is the more design becomes apparent.
Edited by traderdrew, : No reason given.
Edited by traderdrew, : No reason given.

This message is a reply to:
 Message 347 by Wounded King, posted 09-11-2009 1:31 PM Wounded King has replied

Replies to this message:
 Message 369 by Wounded King, posted 09-21-2009 5:51 PM traderdrew has replied

  
traderdrew
Member (Idle past 5180 days)
Posts: 379
From: Palm Beach, Florida
Joined: 04-27-2009


Message 371 of 458 (525241)
09-22-2009 5:10 PM
Reply to: Message 369 by Wounded King
09-21-2009 5:51 PM


Re: Follow the actual evidence
If you want to make a case that the different MotA proteins are functionally distinct then make the argument. Just saying over and over again taht there is no evidence is the purest bull when I have given you the best evidence you can have short of us getting together in a lab and sequencing the genes ourselves.
I lost my train of thought. I just read your message 335 and i'm sure you are correct, however I still remain unconvinced that Darwinism is the only explanation. Obviously there is a great deal of variation in three dimensional protein structures. And I have stated before there are different enzymes that can perform the same function.
Drew, all you are doing is regurgitating the claims of the ID crowd, claims which you simply seem to accept at face value.
Yes, I am pretty much reverberating what the ID crowd says. I am not a scientist and they know more than me. I do have a few original ideas such as Assemblism. I don't see what is wrong with repeating them to see how people react to it.
But all of these things being equal we would still expect the same sequence to produce the same folds.
This is irrelevant though since you concede that other sequences can produce functionally similar, if not the same, folds.
Well apparently they can but I wouldn't expect this to happen between different sets of sequences most of the time. I would think there should be a great amount of variation among specific protein shapes.
And Meyers attribution is enough for you? Do you see why we get the impression you are doing nothing more than cutting and pasting points from ID sites? You don't seem to want to do any research into these topics that doesn't consist of looking up the recieved ID wisdom on them.
Well that is why I have been here. I want to hear more counterpoints.
Why not look at the actual evidence for once rather than a potted digest handed down from the ID movement?
I like Meyer and Behe and I agree most of the time with the few IDists who post on this website. I thought of challenging them but they seem to have their hands full with you guys. Very few times I have totally disagreed with their content but most of the time they could have done a better job in persuading me in favor of their views.
Are you saying that homologous genes in the developing wing and the gills are the result of convergent evolution at the molecular level?
That thought did occur to me.
That the same molecular strutures evolved (or were created/intelligently designed if you will) seperately twice for 2 different functions?
It would serve as a casual explanation.
As usual of course Behe is talking nonsense.
Then where is the crustacean gill to wings theoretical pathway?
And Sean Carroll is right, it was very unexpected. People expected to see much greater divergence and diversity at the genetic level and the existence of such fundamental similar genetic building blocks as the HOX genes and numerous signalling pathways was a radical discovery.
Well then, I would think these similar genetic building blocks should give you clues as to specific Darwinian pathways various ancient organisms took. Where are the gills to wings pathways? I would think the thinking and conjecture says, "The genes were dominant at one point in crustaceans but then became hidden within junk DNA and then expressed themselves again when it was time for wings to evolve." I still can think you all are saying, "It was a surprise but it still can be explained with Darwinian conjecture." Darwinian conjecture is beginning to sound 'amorphous' just as Paul K described ID. And the amorphous description doesn't persuade me the other way a tiny bit because a designer can do what a designer wants.
But the similarity of these pathways, and indeed the patterns of their diversity, are a strong argument for a natural history of life on Earth based on common descent with modification from common ancestral populations.
That is a strong statement and if you can point me to a place that can elaborate on that then I 'might' be persuaded even though I might honestly be afraid to read it.
Edited by traderdrew, : No reason given.

This message is a reply to:
 Message 369 by Wounded King, posted 09-21-2009 5:51 PM Wounded King has replied

Replies to this message:
 Message 372 by Wounded King, posted 09-22-2009 7:43 PM traderdrew has replied

  
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