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Author Topic:   More non-random evolution
Percy
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Posts: 22504
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 3 of 67 (19347)
10-08-2002 9:48 PM
Reply to: Message 1 by peter borger
10-08-2002 9:27 PM


The word random doesn't even appear in the article. The sentence you quoted only notes that, as was already well known, some parts of the genome are more susceptible to mutation than others, and the increased levels of radiation have a greater impact on these "hotspots". Where the mutation takes place is random, but the probability of where the mutation might occur is not equal everywhere.
An analogy would be buildings in an earthquake. Which buildings fall is random, but weaker buildings are more likely. Correspondingly, some portions of the genome are more resistant to change than others.
--Percy

This message is a reply to:
 Message 1 by peter borger, posted 10-08-2002 9:27 PM peter borger has replied

Replies to this message:
 Message 4 by peter borger, posted 10-08-2002 10:05 PM Percy has replied
 Message 52 by Brad McFall, posted 10-16-2002 12:10 PM Percy has not replied
 Message 60 by DanskerMan, posted 01-15-2003 12:30 PM Percy has replied

Percy
Member
Posts: 22504
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 8 of 67 (19377)
10-09-2002 7:46 AM
Reply to: Message 4 by peter borger
10-08-2002 10:05 PM


What was it about the earthquake analogy that you didn't understand, Peter? Like radiation, earthquakes also act randomly, but not all buildings have equal probability of falling because some are weaker than others.
I argued through analogy, while others have explicitly pointed out that some parts of the genome have structural susceptibility to change, and this has all been pointed out to you before. Do you really believe that DNA is equally strong everywhere in the genome? If so, then move the discussion forward by arguing for this point instead of continually restarting the same discussion from the beginning.
--Percy

This message is a reply to:
 Message 4 by peter borger, posted 10-08-2002 10:05 PM peter borger has replied

Replies to this message:
 Message 9 by mark24, posted 10-09-2002 9:56 AM Percy has not replied
 Message 14 by peter borger, posted 10-09-2002 10:32 PM Percy has replied

Percy
Member
Posts: 22504
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 27 of 67 (19516)
10-10-2002 10:51 AM
Reply to: Message 14 by peter borger
10-09-2002 10:32 PM


peter borger writes:

If so, than it is imaginable that mutations are always introduced at the same spot.
Always? That would be wildly improbable. In the human genome there are literally thousands and thousands of places where a mutation might be more likely to occur than the average for loci across the whole genome. All you can say is that some loci are more likely than others to experience a mutation. Mutations can still occur at unlikely locations. Going back to the earthquake analogy, the stronger building is less likely to fall than other buildings, but it is still possible for it to fall while other weaker buildings remain standing. There are no certainties with earthquakes and radiation, only probabilities.

And as observed in mtDNA of distinct primates and human subpopulations usually the same nucleotides are introduced.
There are a wide variety of mutation types, and this only covers one of them. Limiting my comments only to nucleotide substitution, I could accept a tendency toward the same nucleotides being introduced, but saying "usually the same nucleotides are introduced" feels a bit too strong to me. This tendency has two natural origins:
  • Biochemical. Nucleotide substitutions are affected or limited by the rules governing biochemical reactions.
  • Filtering. Some nucleotide substitutions result in expression within the organism of characteristics inconsistent with survival and/or reproduction.
In order to add a supernatural possibility to this list you have to show that at least some mutational tendencies are not explained by these two possibilities.

Thus, mutation is non-random with respect to these features and that would bring down the strongest argument for molecular evolution: sequence similarity.
I don't think you mean to say that it "brings down the strongest argument for molecular evolution." Didn't you mean to say it brings down the strongest argument for common descent?
Anyway, it is only non-random in the sense that what happens is limited by natural laws. When I throw a rock repeatedly into the air at precisely the same angle and speed, the time it takes to fall is non-random, because gravity always acts the same way. When you subject the same biochemical repeatedly to the identical situation, what happens is always the same thing and is non-random, because the laws governing chemical reactions are always the same. Only if you repeated the same biochemical experiment over and over again getting different results each time might it be considered evidence of divine direction. And of course, radiation is the wildcard in this mix. How it "knocks out" a chemcial bond is random, dependent upon precisely where the radiation strikes.

So, how can we discriminate between common descent and common mechanism (whether or not DNA structure related is irrelevant to this observation)?
I hope that the inductions made about the descent of human sub-groups were not made by following single mutational lines. The fewer mutational lines used to determine descent pathways, the less likely they are to be correct, precisely for the reasons you mention, that for a single mutational line it would not necessarily be possible to differentiate between common descent and common mechanism.
But I don't want to lose sight of your original point when you began this thread, which cited an article about radiation causing increased mutational rates at genomic "hotspots". There is nothing non-random about this. Once again revisiting the earthquake scenario, you shake a city harder and the rate at which the weaker buildings fall increases. You radiationally bombard a genome harder, and the rate at which the weaker loci mutate increases.
--Percy

This message is a reply to:
 Message 14 by peter borger, posted 10-09-2002 10:32 PM peter borger has not replied

Percy
Member
Posts: 22504
From: New Hampshire
Joined: 12-23-2000
Member Rating: 4.9


Message 61 of 67 (29194)
01-15-2003 1:15 PM
Reply to: Message 60 by DanskerMan
01-15-2003 12:30 PM


sonnikke writes:
As is usually the case, buildings are designed by an intelligent designer, including being specifically designed to withstand earthquakes. Great analogy to show that Intelligence is required, NOT random mutation or natural selection.
Uh, Sonnikke, the anology was about knocking down the buildings, not designing and constructing them. It took you since October to think this up?
--Percy

This message is a reply to:
 Message 60 by DanskerMan, posted 01-15-2003 12:30 PM DanskerMan has replied

Replies to this message:
 Message 63 by DanskerMan, posted 01-15-2003 4:44 PM Percy has not replied

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