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Author Topic:   Quality Control the Gold Standard
crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 4 of 238 (284784)
02-07-2006 9:13 PM
Reply to: Message 1 by Evopeach
02-07-2006 8:50 PM


No such R&D effort would ever result in a new or higher quality profitable marketable product... not ever and the enterprise would simply go bancrupt.
Boy did you just fall off the turnip truck or what?
quote:
Software configurable hardware, such as Programmable Logic Arrays, are on the market which accept a bit string instruction which is used to configure or “wire up” a hardware circuit to give it a desired architecture. This can be done an indefinite number of times. By treating the bit string instruction as a Genetic Algorithm “chromosome”, one has the means to evolve hardware.
The concept was pioneered by Adrian Thompson who in 1996 evolved a tone discriminator, using fewer than 40 programmable logic gates and no clock signal in a FPGA. This is a remarkably small design for such a device, and it is still not understood how it works. For example, one group of gates has no logical connection to the rest of the circuit, yet is crucial to its function. It is thought that this group somehow modulates the power supply or influences other connections by generating a Magnetic field.
The mechanisms of mutation and natural selection are not only so powerful that they do exactly what you just claimed they can't do - be used to design functioning hardware - but they can design hardware so effective we can't understand how it works.
I'd say that's a fairly effective rebuttal of your OP. Judo chop!
AbE: Sorry, didn't give the cite.
Evolvable hardware - Wikipedia
This message has been edited by crashfrog, 02-07-2006 09:16 PM

This message is a reply to:
 Message 1 by Evopeach, posted 02-07-2006 8:50 PM Evopeach has replied

Replies to this message:
 Message 8 by Evopeach, posted 02-08-2006 9:20 AM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 11 of 238 (284887)
02-08-2006 9:40 AM
Reply to: Message 8 by Evopeach
02-08-2006 9:20 AM


Re: Now back to reality from goo goo land
First the techniques you talk about are designed bit strings much like mag tapes for a tooling machine
Right. Exactly like DNA. Exactly like the issue at hand.
Look, evo, if you didn't understand the argument, it would have been better for you to simply say so, rather than reply to me with this nonsense.

This message is a reply to:
 Message 8 by Evopeach, posted 02-08-2006 9:20 AM Evopeach has replied

Replies to this message:
 Message 17 by Evopeach, posted 02-08-2006 10:02 AM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 12 of 238 (284888)
02-08-2006 9:42 AM
Reply to: Message 10 by Evopeach
02-08-2006 9:39 AM


Re: Preaching to the Choir
The absolutely agreed upon error rate for copying the 3 plus billion base pairs in the human genome is 1 per billion.
My wife's phylogenetics text has a slightly different number; the accepted rate of substitution in nuclear mammalian DNA is more like 3.2 per gbp (billion base-pairs).
So the mutation rate is a little higher than you've been saying. I can cite that from the text if you wish. I notice that you haven't cited anything at all.

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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 15 of 238 (284891)
02-08-2006 9:47 AM
Reply to: Message 6 by Evopeach
02-08-2006 9:04 AM


Re: Preaching to the Choir
One can only wait to see with baited breath what the beneficial effects of cancer and every other horrible disease that are specificially tied to "good" mutations.
Ever heard of Hemoglobin C? It's recent mutated version of the human hemoglobin complex that confers resistance to malaria.
Good oh yes by evolutionary standards because they have been around since the invention of writing so they must be good otherewise they would have been eliminated by natural selection.
Did you and your wife have children? I'm sorry if you did, and they were left motherless, but if you did, then there was no selective pressure against her oncogene, because the cancer it caused didn't prevent her from passing on her genes.
If you hadn't had children yet, then you're mistaken - her gene was selected against.
Also I notice that you don't seem to be terribly concerned about the 10-50-odd mutations you yourself possess.

This message is a reply to:
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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 22 of 238 (284925)
02-08-2006 11:41 AM
Reply to: Message 17 by Evopeach
02-08-2006 10:02 AM


Re: Now back to reality from goo goo land
The issue is that your example is "toy" and did not evolve but was designed, created de neuvo, by an intelligent designer.
So, what you're saying is, you didn't even read the article?
The DNA 7 sigma replication scheme and machinery had to EVOLVE from non-life to life and from the simplest possible, highly error prone replicator (which no one can define or demonstrate)
Why would it be both simple and error-prone? Spoken like someone who doesn't know anything about design.

This message is a reply to:
 Message 17 by Evopeach, posted 02-08-2006 10:02 AM Evopeach has replied

Replies to this message:
 Message 26 by Evopeach, posted 02-08-2006 12:42 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 31 of 238 (284967)
02-08-2006 1:02 PM
Reply to: Message 26 by Evopeach
02-08-2006 12:42 PM


Re: Now back to reality from goo goo land
This is supposed to be a forum restricting personal attacks.. how about following the guidelines.
I have not ever personally attacked you.
On the other hand, your topic subtitles have been nothing but statements about what morons your opponents are.
Yet although a replicator of sorts, very small and simplistic in size and complexity it has very high error rates ..
The RNA replicators I'm familiar with have no error rates, which is what makes them not living things. It's the errors that are crucial - yes, even though some of them are fatal - to the evolution of living things.
thus it is quite problimatical to even envision how it could evolve anything before dying.
Probably most of them wouldn't. If you're under the impression that the history of living things is anything but the record of a vast amount of death, you're sadly misinformed.

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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 56 of 238 (285035)
02-08-2006 5:12 PM
Reply to: Message 55 by Percy
02-08-2006 5:10 PM


Re: Hey, can I play?
I presumed it was about what was in the OP, about how engineers would "never" use mutation and selection in the process of design.
After that was rebutted with examples of engineers doing exactly that, EP didn't see fit to continue that discussion. At this point he seems mostly content to call people names and then call "foul" against imagined infractions by his opponents.

This message is a reply to:
 Message 55 by Percy, posted 02-08-2006 5:10 PM Percy has replied

Replies to this message:
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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 120 of 238 (285461)
02-10-2006 9:58 AM
Reply to: Message 119 by Evopeach
02-10-2006 9:51 AM


Re: References
Yeah but you're just looking at substitution rates. There are many other kinds of mutation that you are apparently ignoring.

This message is a reply to:
 Message 119 by Evopeach, posted 02-10-2006 9:51 AM Evopeach has replied

Replies to this message:
 Message 123 by Evopeach, posted 02-10-2006 12:08 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 125 of 238 (285534)
02-10-2006 12:23 PM
Reply to: Message 123 by Evopeach
02-10-2006 12:08 PM


Re: References
If you will read carefully I said the error rate in copying once the entire human genome according to the best literature is 1 base pair error in the new copy per billion base pairs.
No, you said the substitution rate. As I said, there are other types of mutations that you are ignoring.
Mutation in total includes mutagens, radiation induced, environmentals etc. and are perhaps avoidable.
These were not what I was referring to. I presumed that you were aware of the other types of mutation that you were ignoring; apparently I was wrong. Other types of mutations that you have ignored include deletions, additions, duplications, and reversals.
My point stands.
Your point fails because you're only looking at substitutions and not the other kinds of mutation.

This message is a reply to:
 Message 123 by Evopeach, posted 02-10-2006 12:08 PM Evopeach has replied

Replies to this message:
 Message 131 by Evopeach, posted 02-10-2006 1:56 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 127 of 238 (285575)
02-10-2006 1:19 PM
Reply to: Message 126 by Evopeach
02-10-2006 1:12 PM


Re: Going back off topic
SO you think the comparision of the publics k-12 exposure to relativity theory and quantum mechanics is commensurate with their exposure to all things evolutionary.
I'm a product of public schools. I had learned far more about relativity and QM by the time I graduated than I had ever learned about evolution.
That's my own experience, but the fact that almost no layperson - even the intelligent ones - has any accurate knowledge about evolutionary theories and reasoning indicates to me that my experience isn't unusual.
I notice too that you offer no evidence to rebut him; you only accuse him of dishonesty. How you mistook that for a legitimate argument I cannot imagine.
The public from age 3 to 30 is pillaried with evolutionary dogma from every avenue in American life.
No, they're not. Just minsinformation about evolution. Misunderstandings about evolution. And outright fabrications of the model by creationists like yourself.

This message is a reply to:
 Message 126 by Evopeach, posted 02-10-2006 1:12 PM Evopeach has replied

Replies to this message:
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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 132 of 238 (285614)
02-10-2006 1:58 PM
Reply to: Message 131 by Evopeach
02-10-2006 1:56 PM


Re: References
After proofreading, the error rate is 1 in 1 billion base pairs.
Just for substitutions, though. And actually the accurate figure is something like 3.2 substitutions for mammalian nuclear DNA. It goes up and down for other species.
And that still doesn't address other mutations, like duplications and reversals. Just stop me now if you don't understand what I'm talking about.

This message is a reply to:
 Message 131 by Evopeach, posted 02-10-2006 1:56 PM Evopeach has replied

Replies to this message:
 Message 134 by Evopeach, posted 02-10-2006 2:06 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 135 of 238 (285626)
02-10-2006 2:12 PM
Reply to: Message 134 by Evopeach
02-10-2006 2:06 PM


Re: References
You are not paying attention.
No, you're not paying attention. I've told you twice now that I'm not talking about environmental mutagens and UV rays and the like; I'm telling you that there's more than one kind of mutation, and the data that you're looking at doesn't include all of them. It just looks at substitutions, one of the basic mutations commonly examined in molecular phylogenetics.
That does not change the fact that the DNA molecule is routinely replicated with only three base pair errors per billion.
I've told you three times now - there's more errors than that, even, because you're looking only at substitutions and not other mutations. You're reading tables that say "substitutions" and assuming that that's the total number of mutations that happens.
It isn't. You're looking at sources designed for phylogenetics instruction, because phylogeneticists begin by considering only substitutions. But more mutations happen than just substitutions, just from the regular copying process alone.

This message is a reply to:
 Message 134 by Evopeach, posted 02-10-2006 2:06 PM Evopeach has replied

Replies to this message:
 Message 137 by Evopeach, posted 02-10-2006 2:34 PM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 138 of 238 (285687)
02-10-2006 5:03 PM
Reply to: Message 136 by Evopeach
02-10-2006 2:28 PM


Re: Going back off topic
As in the hundreds of computer games, books and media forms presenting dinosaurs and cave men etc. and all things evolutionary.
You've never heard of a little show called Star Trek?

This message is a reply to:
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crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 139 of 238 (285688)
02-10-2006 5:04 PM
Reply to: Message 137 by Evopeach
02-10-2006 2:34 PM


Re: References
No I'm looking at the Human Genome literature and a book published called exons entrons and ... which documents the results and history of same and about a dozen papers on the subject via google.
I am also looking at the net error rate after all repair mechanisms in the cell have performed their work.
Right. And, in each of those sources, you're getting the substitution rate. We've been over this.

This message is a reply to:
 Message 137 by Evopeach, posted 02-10-2006 2:34 PM Evopeach has replied

Replies to this message:
 Message 142 by Evopeach, posted 02-11-2006 9:22 AM crashfrog has replied

crashfrog
Member (Idle past 1497 days)
Posts: 19762
From: Silver Spring, MD
Joined: 03-20-2003


Message 145 of 238 (285842)
02-11-2006 1:43 PM
Reply to: Message 142 by Evopeach
02-11-2006 9:22 AM


Re: References
So the rate that was measured or calculated from direct observations , etc. by the various scientific teams were just lucky. The rate they measured was by luck free of all other sources of error repeatedly so that their results wee only for one source and not the net effect of the cells operations including repair of many errors.. just not all.
I guess I don't understand what the hell you're trying to say. They stated out by wondering at what rate substitutions occured; they observed how many substitutions occured; then the reported the rate at which substitutions occured. Luck didn't have anything to do with it.
Then, you read a table of the rate at which substitutions occured, and assumed that substitutions accounted for all mutations that ever occur in nuclear mammalian DNA. And then when I pointed out your error, you started calling me names out of embarrasment. Seems pretty straightforward to me.
You've read a table of the rate of nuclear substitutions, and misunderstood it to refer to the general mutation rate of nuclear DNA. This error has been pointed out to you several times so far but you have refused to correct yourself.

This message is a reply to:
 Message 142 by Evopeach, posted 02-11-2006 9:22 AM Evopeach has replied

Replies to this message:
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