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Author Topic:   Evolution Requires Reduction in Genetic Diversity
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 736 of 1034 (759002)
06-07-2015 3:09 PM
Reply to: Message 725 by NoNukes
06-06-2015 10:22 AM


Re: Genetic Diversity
Diversity within populations that are fairly stable, meaning they aren't actively evolving, doesn't have anything to do with my argument; it's only when they diverge that the phenomena I'm talking about occur.
This is not an accurate statement of your position. Your position requires that it be impossible to gain diversity in a non-evolving population.
Perhaps I misstated something, but I do try to allow for the mutations everybody insists upon even if I doubt their contribution to normal genetic variation; and allowing for mutations means a non-evolving population could gain diversity. Sorry if I said anything that implies otherwise.
For example, in addressing the lunar Russian example you claimed, without any argument just assertion, that when the lunar russians returned, all new mutation generated diversity that occurred on the moon would be lost upon reintegration.
Upon reintegration? Doesn't sound like anything I'd say. But I do often say that if it becomes part of a population split or other form of selection, then any new diversity will only be subjected to the same reduction in genetic diversity that always occurs with the generation of new phenotypes in microevolution. This is assertion, yes, but it's also logical if you just think it through.
There is no question that at the time of reintegration there is new diversity. But you have claimed that the non-diverged population will lose diversity gained from mutations.
Can't have said or meant the "non-diverged" population, since it's the divergence that brings out the new traits along with the loss of genetic diversity. The population of which the novel traits are a part will lose genetic diversity if it evolves, or diverges, which happens with selection or with random population splits, bringing out new traits while reducing genetic diversity.
Or let's make it short and sweet. If you are not claiming anything about non diverging populations, then you lose the argument. Because non isolated populations can gain diversity from mutations even without selection.
If mutations exist and do anything useful, yes they will contribute added genetic diversity and I can't imagine I ever said anything otherwise. It is WHEN THE PROCESSES OF SELECTION, RANDOM SELECTION AS IN POPULATION SPLITS AT LEAST, are in operation and there IS divergence, that genetic diversity is decreased.
Once selection occurs, and it would not occur upon every mutation, even if there is some some attendant loss of diversity, if that is the case, diversity need not fall below that which existed at the time the original population first formed. So there need not be a net loss of diversity.
You absolutely are not getting it. How much loss of diversity occurs is strictly a function of the size of the population that splits off, or in the case of natural selection how drastic the selection is. If the population is relatively large there may not be an appreciable loss, though there will be SOME loss, but if it's fairly small the loss could be quite great. It doesn't "care" what the level of diversity used to be.

This message is a reply to:
 Message 725 by NoNukes, posted 06-06-2015 10:22 AM NoNukes has not replied

  
NoNukes
Inactive Member


(1)
Message 737 of 1034 (759004)
06-07-2015 3:51 PM
Reply to: Message 735 by Faith
06-07-2015 2:49 PM


Re: Genetic Diversity / Variation / Difference? Yikes!
How often do mutations generate new genes? It's unlikely they even generate viable new alleles. But as usual you aren't getting it: it doesn't matter where the genetic material comes from, when it undergoes the processes of microevolution the gene pool will lose genetic diversity
The reduction of diversity only occurs at selection on a phenotype corresponding to the mutation. When a mutation is not subjected to selection pressure it simply makes one animal in the population genetically diverse and possibly phenotypically diverse from its peers. A new eye color gene might be an example of such. By any measure that I care about, this represents an increase in diversity.
So if several mutations occur and spread through the population each of which is not subjected to selection is followed by one mutation on which selection operates, the net effect is that the new population is potentially more diverse than the previous population prior to the occurrence of any mutations.
I have yet to see you directly tackle the above scenario despite my having given it several times.
How often do mutations generate new genes? It's unlikely they even generate viable new alleles.
Just as soon as you decide to make this a part of your model, let me know. The discussion will change to one of you simply denying the evidence we have for mutations that add new alleles.
Interesting you say that in response to the definition at Wikipedia.
Show me where the definition in Wikipedia excludes the possibility of the generation of new genes and acknowledges only the addition of new alleles for the same gene as constituting genetic diversity. If you cannot do that, then you misread my post.
Edited by NoNukes, : No reason given.

Under a government which imprisons any unjustly, the true place for a just man is also in prison. Thoreau: Civil Disobedience (1846)
History will have to record that the greatest tragedy of this period of social transition was not the strident clamor of the bad people, but the appalling silence of the good people. Martin Luther King
If there are no stupid questions, then what kind of questions do stupid people ask? Do they get smart just in time to ask questions? Scott Adams

This message is a reply to:
 Message 735 by Faith, posted 06-07-2015 2:49 PM Faith has replied

Replies to this message:
 Message 738 by Faith, posted 06-07-2015 10:36 PM NoNukes has replied

  
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 738 of 1034 (759011)
06-07-2015 10:36 PM
Reply to: Message 737 by NoNukes
06-07-2015 3:51 PM


Re: Genetic Diversity / Variation / Difference? Yikes!
The reduction of diversity only occurs at selection on a phenotype corresponding to the mutation. When a mutation is not subjected to selection pressure it simply makes one animal in the population genetically diverse and possibly phenotypically diverse from its peers. A new eye color gene might be an example of such. By any measure that I care about, this represents an increase in diversity.
Yes, no argument except of course I doubt that mutations ever create anything genetically useful. But hypothetically sure, what you are saying is correct and didn't I just agree that mutations would increase genetic diversity? So why are you arguing about it?
So if several mutations occur and spread through the population each of which is not subjected to selection is followed by one mutation on which selection operates, the net effect is that the new population is potentially more diverse than the previous population prior to the occurrence of any mutations.
Again, true enough.
I have yet to see you directly tackle the above scenario despite my having given it several times.
Funny, I thought I'd answered it many times.
Faith writes:
How often do mutations generate new genes? It's unlikely they even generate viable new alleles.
Just as soon as you decide to make this a part of your model, let me know. The discussion will change to one of you simply denying the evidence we have for mutations that add new alleles.
I've heard of a few, very few, flukes really, but it does not make a difference to my argument as I keep saying, because there must be a decrease in genetic diversity wherever microevolution is actively occurring. It doesn't matter if the mutation is in the evolving pool or in a stable population, but IF new phenotypes are being generated there will be a corresponding loss of genetic diversity IN THAT EVOLVING POOL.
Interesting you say that in response to the definition at Wikipedia.
Show me where the definition in Wikipedia excludes the possibility of the generation of new genes and acknowledges only the addition of new alleles for the same gene as constituting genetic diversity. If you cannot do that, then you misread my post.
I merely pointed out that two of the measures of genetic diversity given in the article are the same as those I've many times referred to as measures of genetic diversity, in answer to HBD who was saying we need to be able to measure it. So your saying "my" definitions are uninteresting, which in that case are the same as Wikipedia's definition, was a strange thing for you to say. I don't know how you got from that to the rest of your comments.

This message is a reply to:
 Message 737 by NoNukes, posted 06-07-2015 3:51 PM NoNukes has replied

Replies to this message:
 Message 739 by NoNukes, posted 06-07-2015 11:46 PM Faith has replied

  
NoNukes
Inactive Member


(1)
Message 739 of 1034 (759016)
06-07-2015 11:46 PM
Reply to: Message 738 by Faith
06-07-2015 10:36 PM


Re: Genetic Diversity / Variation / Difference? Yikes!
NoNukes writes:
So if several mutations occur and spread through the population each of which is not subjected to selection is followed by one mutation on which selection operates, the net effect is that the new population is potentially more diverse than the previous population prior to the occurrence of any mutations
Faith writes:
Again, true enough.
So, why isn't this discussion over? I have provided a scenario under which evolution can occur without a net loss of diversity. Evolution which occurs under this particular scenario need never reach a dead end.
It doesn't matter if the mutation is in the evolving pool or in a stable population, but IF new phenotypes are being generated there will be a corresponding loss of genetic diversity IN THAT EVOLVING POOL.
Well no. Phenotypes that occur without selection do not reduce diversity. You just end up in a situation with mixed phenotypes which is not a reduction in diversity overall. And as you've already admitted, it is possible to replenish losses in diversity with mutations.
I merely pointed out that two of the measures of genetic diversity given in the article are the same as those I've many times referred to as measures of genetic diversity
Yes, the problem is that a given measure, taken alone, might not cover all possible methods of increasing diversity. If you pick a measure that excludes certain mutations, particularly if those mutations have been observed, then that measure is not a useful definition for this debate even if the measure is useful in some other specific situations.
I've heard of a few, very few, flukes really, but it does not make a difference to my argument as I keep saying, because there must be a decrease in genetic diversity wherever microevolution is actively occurring.
And yet I've shown that it does matter and you've seemingly agreed. The active selection need not remove all diversity added by prior mutations. Only the particular variation on which selection occurs reduces diversity. So when wings are selected, any alleles that affect eye color, tail curling, etc. remain in the gene pool.

Under a government which imprisons any unjustly, the true place for a just man is also in prison. Thoreau: Civil Disobedience (1846)
History will have to record that the greatest tragedy of this period of social transition was not the strident clamor of the bad people, but the appalling silence of the good people. Martin Luther King
If there are no stupid questions, then what kind of questions do stupid people ask? Do they get smart just in time to ask questions? Scott Adams

This message is a reply to:
 Message 738 by Faith, posted 06-07-2015 10:36 PM Faith has replied

Replies to this message:
 Message 740 by Faith, posted 06-08-2015 12:07 AM NoNukes has not replied
 Message 741 by Faith, posted 06-08-2015 12:54 AM NoNukes has replied

  
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 740 of 1034 (759019)
06-08-2015 12:07 AM
Reply to: Message 739 by NoNukes
06-07-2015 11:46 PM


Re: Genetic Diversity / Variation / Difference? Yikes!
NoNukes writes:
So if several mutations occur and spread through the population each of which is not subjected to selection is followed by one mutation on which selection operates, the net effect is that the new population is potentially more diverse than the previous population prior to the occurrence of any mutations
Faith writes:
Again, true enough.
So, why isn't this discussion over? I have provided a scenario under which evolution can occur without a net loss of diversity. Evolution which occurs under this particular scenario need never reach a dead end.
You haven't described anything about evolution. You've argued that mutations increase genetic diversity. That's not evolution.
It doesn't matter if the mutation is in the evolving pool or in a stable population, but IF new phenotypes are being generated there will be a corresponding loss of genetic diversity IN THAT EVOLVING POOL.
Well no. Phenotypes that occur without selection do not reduce diversity.
Right, if they are mutations they increase genetic diversity. But if you are just talking about scattered new phenotypes within a population that's not evolution, which is the subject here. If, however, those phenotypes come to characterize a new population or be isolated as part of the new characteristics within a new population, that would be evolution, and it would be accompanied by the necessary loss in genetic diversity I'm talking about.
You just end up in a situation with mixed phenotypes which is not a reduction in diversity overall.
And is not evolution which is the formation of new species.
And as you've already admitted, it is possible to replenish losses in diversity with mutations.
Which is not evolution. If and when evolution occurs (leading toward speciation) the increase in diversity will be lost. Not to say any new traits would be lost, should they exist, but genetic diversity in the gene pool would be lost.
I merely pointed out that two of the measures of genetic diversity given in the article are the same as those I've many times referred to as measures of genetic diversity
Yes, the problem is that a given measure, taken alone, might not cover all possible methods of increasing diversity. If you pick a measure that excludes certain mutations, particularly if those mutations have been observed, then that measure is not a useful definition for this debate even if the measure is useful in some other specific situations.
Both alleles per locus and percentage of heterozygosity would certainly not miss any contributions by mutations.
I've heard of a few, very few, flukes really, but it does not make a difference to my argument as I keep saying, because there must be a decrease in genetic diversity wherever microevolution is actively occurring.
And yet I've shown that it does matter and you've seemingly agreed.
I have? Sorry, hasn't happened. This is just your usual misunderstanding of what I'm arguing.
The active selection need not remove all diversity added by prior mutations. Only the particular variation on which selection occurs reduces diversity. So when wings are selected, any alleles that affect eye color, tail curling, etc. remain in the gene pool.
But you think innovative new traits are evolution and they are not. Even if they existed. Evolution is getting a new species which involves enough reproductive isolation to produce a set of traits uniquely characteristic of that species, and it's the processes that bring that about that require loss of genetic diversity.
Only the particular variation on which selection occurs reduces diversity.
This is true. Wherever even a single trait is selected there will be a corresponding loss of genetic diversity at that locus. This can even serve as a model for what I'm talking about. But the example I keep using is the population split because in that case ALL the new high-frequency traits are in a sense "selected" and alleles for other versions of those traits will be low-frequency and may eventually drop out altogether. It is in whole populations that you get the microevolution that leads to new subspecies.
Again, the innovative new traits themselves would not necessarily be lost, they might even dominate the phenotypic presentation of the new species, yet the species itself would be genetically too reduced to continue evolving.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

This message is a reply to:
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Replies to this message:
 Message 743 by Admin, posted 06-08-2015 6:58 AM Faith has replied
 Message 747 by Faith, posted 06-08-2015 7:15 AM Faith has not replied

  
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 741 of 1034 (759021)
06-08-2015 12:54 AM
Reply to: Message 739 by NoNukes
06-07-2015 11:46 PM


Re: Genetic Diversity / Variation / Difference? Yikes!
The active selection need not remove all diversity added by prior mutations. Only the particular variation on which selection occurs reduces diversity. So when wings are selected, any alleles that affect eye color, tail curling, etc. remain in the gene pool.
Let's try this one again.
Yes, the wings mutation would stay in the population along with the alleles for the eye color and type of tail and so on. Scattered in a stable population they could remain there, even get passed on randomly, all without evolution occurring.
It's ONLY when evolution occurs that the reduced genetic diversity would occur.
And that evolution could occur by the formation of a new separated daughter population.
Or it could occur within the original population. That is, the mutated wings, a particular eye color and tail type that are different from that of the population at large, could randomly come to characterize that very population over many generations of breeding exclusively among those individuals that carry those traits. In that case you'd see the same thing occurring as occurs in separated daughter populations reproductively isolated by physical barriers: You'll see the new allleles replace other alleles for the same traits, LOSING THOSE OTHER ALLELES over time, which is the loss of genetic diversity I'm always talking about, until you have a completely new set of traits forming a new subspecies, or even possibly a "species" in the sense of speciation, which also has reduced genetic diversity, even possibly complete genetic depletion, ALTHOUGH it will have new eye color, new tail style AND WINGS. Yet be too genetically depleted to evolve further.

This message is a reply to:
 Message 739 by NoNukes, posted 06-07-2015 11:46 PM NoNukes has replied

Replies to this message:
 Message 746 by Admin, posted 06-08-2015 7:07 AM Faith has replied
 Message 756 by NoNukes, posted 06-08-2015 10:45 AM Faith has not replied

  
Admin
Director
Posts: 13042
From: EvC Forum
Joined: 06-14-2002
Member Rating: 2.3


Message 742 of 1034 (759025)
06-08-2015 6:40 AM
Reply to: Message 735 by Faith
06-07-2015 2:49 PM


Moderator Clarification Request
Faith writes:
No, they do add diversity, or would if they actually make viable alleles, which I doubt, but they would only make alleles for the existing genes for those little insignificant traits, hardly ever if at all an actual new gene. So all you are getting is new variations on those inconsequential traits, you are NOT getting the "completely new traits and functions" evolution requires.
Concerning mutations that create new alleles, you seem to be saying that a new allelic combination involving existing alleles can create "completely new traits and functions," while a new allelic combination involving a newly mutated allele can only create "inconsequential traits." Is that correct?

--Percy
EvC Forum Director

This message is a reply to:
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Replies to this message:
 Message 745 by Faith, posted 06-08-2015 7:06 AM Admin has replied

  
Admin
Director
Posts: 13042
From: EvC Forum
Joined: 06-14-2002
Member Rating: 2.3


Message 743 of 1034 (759026)
06-08-2015 6:58 AM
Reply to: Message 740 by Faith
06-08-2015 12:07 AM


Moderator Clarification
Faith writes:
You haven't described anything about evolution. You've argued that mutations increase genetic diversity. That's not evolution.
I'm trying to discourage redefining existing terms. Mutations increasing genetic diversity is most certainly part of the definition of evolution.
If what you're trying to say is that in your view mutations do not increase genetic diversity then that is self-evidently false. Using alleles per locus as the measure of genetic diversity, then if a new allele for a locus comes about via mutation it increases the number of alleles at that locus and must of mathematical necessity increase the alleles per locus.

This message is a reply to:
 Message 740 by Faith, posted 06-08-2015 12:07 AM Faith has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 744 of 1034 (759027)
06-08-2015 7:03 AM
Reply to: Message 743 by Admin
06-08-2015 6:58 AM


Re: Moderator Clarification
I will try to be clearer but I am using evolution and have always used it to refer to the active acquisition of new phenotypes in a daughter population.
I've been VERY clear that if mutations occur they do increase genetic diversity so I don't know how you are get\ing anything else.

This message is a reply to:
 Message 743 by Admin, posted 06-08-2015 6:58 AM Admin has replied

Replies to this message:
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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 745 of 1034 (759028)
06-08-2015 7:06 AM
Reply to: Message 742 by Admin
06-08-2015 6:40 AM


Re: Moderator Clarification Request
No Nukes complained that I thought mutations only made alleles and not genes, talking about alleles as if they were inconsequential small traits. I don't think mutations make either alleles or genes but for the sake of discussion I allowed both and I don't know what happened after that. I'll try to come back to it later.

This message is a reply to:
 Message 742 by Admin, posted 06-08-2015 6:40 AM Admin has replied

Replies to this message:
 Message 748 by Admin, posted 06-08-2015 7:16 AM Faith has replied
 Message 757 by NoNukes, posted 06-08-2015 11:34 AM Faith has replied

  
Admin
Director
Posts: 13042
From: EvC Forum
Joined: 06-14-2002
Member Rating: 2.3


Message 746 of 1034 (759029)
06-08-2015 7:07 AM
Reply to: Message 741 by Faith
06-08-2015 12:54 AM


Moderator Clarification Request
Faith writes:
Yes, the wings mutation would stay in the population along with the alleles for the eye color and type of tail and so on. Scattered in a stable population they could remain there, even get passed on randomly, all without evolution occurring.
It's ONLY when evolution occurs that the reduced genetic diversity would occur.
And that evolution could occur by the formation of a new separated daughter population.
I don't think you really mean "evolution" in the above passage. For example, you say that the passing on of various alleles in a population would not be evolution, but it most definitely is part of evolution.
Might you mean "new phenotype creation?"

--Percy
EvC Forum Director

This message is a reply to:
 Message 741 by Faith, posted 06-08-2015 12:54 AM Faith has replied

Replies to this message:
 Message 749 by Faith, posted 06-08-2015 7:17 AM Admin has replied

  
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 747 of 1034 (759030)
06-08-2015 7:15 AM
Reply to: Message 740 by Faith
06-08-2015 12:07 AM


Re: Genetic Diversity / Variation / Difference? Yikes!
Only the particular variation on which selection occurs reduces diversity.
This is true. Wherever even a single trait is selected there will be a corresponding loss of genetic diversity at that locus.
But I realized this is only true in the abstract, while in reality single traits can't be selected, it's whole individuals that are selected, for that trait. But you can't select the trait in isolation so you are selecting all the traits possessed by the individuals that possess it, and reducing, even possibly losing, alleles for other traits in the individuals that don't possess the selected trait. That would be a complex math problem but at least you are going to get a new daughter population this way with its own allele frequencies as usual.

This message is a reply to:
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Replies to this message:
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Admin
Director
Posts: 13042
From: EvC Forum
Joined: 06-14-2002
Member Rating: 2.3


Message 748 of 1034 (759031)
06-08-2015 7:16 AM
Reply to: Message 745 by Faith
06-08-2015 7:06 AM


Moderator Ruling
Faith writes:
No Nukes complained that I thought mutations only made alleles and not genes, talking about alleles as if they were inconsequential small traits. I don't think mutations make either alleles or genes but for the sake of discussion I allowed both and I don't know what happened after that. I'll try to come back to it later.
This doesn't help resolve the issue I raised, so I'm just going to rule that new allele combinations involving mutated alleles can have just as great an impact on phenotype as those involving existing alleles, and perhaps even greater.

--Percy
EvC Forum Director

This message is a reply to:
 Message 745 by Faith, posted 06-08-2015 7:06 AM Faith has replied

Replies to this message:
 Message 750 by Faith, posted 06-08-2015 7:18 AM Admin has replied

  
Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 749 of 1034 (759032)
06-08-2015 7:17 AM
Reply to: Message 746 by Admin
06-08-2015 7:07 AM


Re: Moderator Clarification Request
No, I mean active microevolution as I have been using it throughout this discussion. So all I can do is try to see where the confusion lies and try to word things better. But it will have to wait until later.

This message is a reply to:
 Message 746 by Admin, posted 06-08-2015 7:07 AM Admin has replied

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 750 of 1034 (759033)
06-08-2015 7:18 AM
Reply to: Message 748 by Admin
06-08-2015 7:16 AM


Re: Moderator Ruling
Just as much I wouldn't argue with, possibly greater no way.

This message is a reply to:
 Message 748 by Admin, posted 06-08-2015 7:16 AM Admin has replied

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