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Author Topic:   Why Darwinism is wrong
Jianyi Zhang
Inactive Member


Message 121 of 305 (206022)
05-07-2005 11:45 PM
Reply to: Message 117 by mick
05-07-2005 8:01 PM


Re: talking about mutation before
Originally posted by mick:
your mistake here is to think that speciation occurs in individual organisms.
In the cases I list in OP: lateral transfer in bacteria, polyploids in plants, generation of asexuals from sexual animals (virgin births), generation of SARS or HIV and many virus, incorporation of mitochondria by symbiosis. All of these cases support biodiversity or speciation start at individuals. Do you have any cases to support it occur at population level, beside your wide imagination.
It is a mistake not think speciation occurs in individual organisms.
Even by Mayr, so-called top Darwinist in the last century, new species can occur by a pair of organism.
This is a significant misunderstanding of the conemporary view of speciation, in which speciation occurs between divergent populations of organisms.
It is your or other Darwinian view of speciation, in which speciation occurs between divergent populations of organisms.
all of the references I provided in the article by Wu and Ting take this idea for granted.
This only means these authors Darwinists, or something close to that.
Why does everybody else take their idea for granted?
You just repeat of a typical story or imagination by current evolution theorists with Xiphophorus example, it is not worthy of my argument line by line.
Assuming fish A evolve into fish B, fish A has genetic structure A, fish B has genetic structure B.
I just have two questions:
1) Can genetic structure A become structure B random mutation without NS? Yes, or No please?
2) If what you said is correct,
structure A:
AAABBBCCC
AaABBbccc
structure B:
AaABBbCCc
aaABBbCcc
A, B, C can be structural or regulatory genes
That means all genes are same, only difference is expression.
structure B should not be:
AaAYYBBbCCcZZZ
aaAyyBBbCccZZZ
If you agree, let me know. If not, please let me know how
structure A:
AAABBBCCC
AaABBbccc
evolve into
AaAYYBBbCCcZZZ
aaAyyBBbCccZZZ
by your model?

Jianyi Zhang

This message is a reply to:
 Message 117 by mick, posted 05-07-2005 8:01 PM mick has replied

Replies to this message:
 Message 128 by mick, posted 05-08-2005 1:57 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 122 of 305 (206023)
05-07-2005 11:50 PM
Reply to: Message 120 by nator
05-07-2005 11:11 PM


Re: getting it wrong and right
Originally posted by schrafinator:
Jianyi, where did you earn your Biology degree, and what degree level are you at?
Even I do not think it related with the topic, I can tell you that I have PhD in molecular biology from a reputated US school.

Jianyi Zhang

This message is a reply to:
 Message 120 by nator, posted 05-07-2005 11:11 PM nator has replied

Replies to this message:
 Message 124 by nator, posted 05-08-2005 7:51 AM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 123 of 305 (206033)
05-08-2005 12:50 AM
Reply to: Message 112 by mick
05-07-2005 6:43 PM


Originally posted by mick:
In Xiphophorus, there are differences between species in the expression level of promoters and suppressors acting on an oncogene.
I assume you mean X. maculatus and X. helleri. What are sample sizes in the study? What are the ranges, means and standard deviations in these two species?
Hybridization between X. maculatus and X. helleri is unsuccessful because the genetically-determined difference in expression levels of promoters and suppressors in the parent species result in offspring that die of cancer. Consequently, the oncogene and its associated regulatory elements act as a reproductive isolation mechanism. The evolutionary hypothesis is that accumulated mutations in the regulatory system underlying oncogene activity result in reproductive isolation between divergent populations. Species integrity in these fish is maintained by the Xmrk-2 locus.
It is easy to apply instantaneous model to explain the case, I assume them true distinct species. Gross mutations can occur in parental species, with one piece DNA into its genome. There are multiple genes affected, including promoters and suppressors in the parent species. There might be some factors or isolated mechanism involved, which is needed to be explored.
This is one possible mechanism by which reproductive isolation can result from small changes in single genes.
The same case can be explained by ST model, just much better.
It appears that speciation can indeed result from or be maintained by random mutation and natural selection.
Without Darwinian RMNS, the speciation could occur more reasonablly. Why could they not occur by ST model? ST model can provide any explanation available to Darwin's RMNS, not vice versa.

Jianyi Zhang

This message is a reply to:
 Message 112 by mick, posted 05-07-2005 6:43 PM mick has not replied

Jianyi Zhang
Inactive Member


Message 125 of 305 (206091)
05-08-2005 10:58 AM
Reply to: Message 124 by nator
05-08-2005 7:51 AM


Re: getting it wrong and right
Who was your advisor, and can we read any of your published papers?
Theoritically, you can. But I do not think it related with the topic.
Why do you need to read the paper for my claim that Darwinism is wrong?

Jianyi Zhang

This message is a reply to:
 Message 124 by nator, posted 05-08-2005 7:51 AM nator has replied

Replies to this message:
 Message 143 by nator, posted 05-08-2005 9:10 PM Jianyi Zhang has not replied

Jianyi Zhang
Inactive Member


Message 126 of 305 (206099)
05-08-2005 11:46 AM
Reply to: Message 119 by NosyNed
05-07-2005 11:00 PM


Re: getting it wrong and right
Originally posted by NosyNed:
I would be interested in a quote from the Mayr source on this topic.
Read his books, such as "What is biology?" and "A long augument".
Even search geographical isolation or read some review articles.
I would, however, agree that in theory NS is not needed once populations are isolated. All you have to do is get enough drift would you not?
Both NS and geographical isolation has nothing to do with initial seeds of new species.
However, NS is very hard to avoid in the real world. So it will be acting as well.
You cannot avoid NS at all, it acts every seconds. However, NS is a filter, not an incubator, it keeps only something available, and does not create anything unborn.
Certainly if the separated populations are actually geographically separated in different environments then NS will hasten the chances of speciation.
No, without geographical isolation and NS, speciation occurs every seconds. Ones have no way to find them, as they are very few, hide somewhere.
One of which is populations that are separated and moving in the direction of separate species. This has been observed.
Organism in different locations might be different with certain allele frequencies, which does not mean they become different species by biological sense. People living in Russia have different melanin genes or genes expression from ones in Ethopia, do they become different species?
Ring species are another example.
Ring species are related with geographical locations, not geographical
isolation. Read some papers first.
A falsification could be performed if a population was separated and did not show any divergance. Since populations have not only show divergance but actual speciation this particular falsification fails.
Divergance is everywhere. which only means organism adapative to local environment by NS. If every organisms are divergant, some organis evolve instantaneously, some do by geograpical isolation according to Darwinism, that means divergance has nothing to do with speciation.
All of these organism I show in my OP are divergant, however, these biodiversity has nothing to do with geographical isolation. Your case does not falsify anything, and only shows your lack of understanding.
1) Populations undergo genetic changes when mutations occur and selection or drift happens.
Yes. so what?
2) If two separate but genetic nearly identical populations are undergoing such changes but have NO gene flow between them the changes in each population will be different.
It is impossible to have nearly identical populations, even identical twins has some differences. With or without gene flow, two populations are different.
3) Enough changes can, if they are in the right places prevent fertile matings between the populations.
Enough changes? by what? by NS or geographical isolation, No, they are still same species.
This message has been edited by Jianyi Zhang, 05-08-2005 12:43 PM
This message has been edited by Jianyi Zhang, 05-08-2005 12:57 PM

Jianyi Zhang

This message is a reply to:
 Message 119 by NosyNed, posted 05-07-2005 11:00 PM NosyNed has replied

Replies to this message:
 Message 127 by NosyNed, posted 05-08-2005 1:43 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 129 of 305 (206131)
05-08-2005 2:39 PM
Reply to: Message 128 by mick
05-08-2005 1:57 PM


Re: talking about mutation before
Differences in allele frequency between populations of a single species, have been demonstrated repeatedly, and empirically, in the field.
You and your neighbor has different allele frequency, are you going to become different species?
Unless your theory can account for such facts in Xiphophorus and Drosophila, then you theory is simply worse than the Darwinian theory.
Why does not my theory account for facts in Xiphophorus and Drosophila?
There is no reason why Darwinists should accept a theory that performs worse than the current accepted theory.
I do not expect Darwinists change their faith. Who cares?

Jianyi Zhang

This message is a reply to:
 Message 128 by mick, posted 05-08-2005 1:57 PM mick has replied

Replies to this message:
 Message 130 by mick, posted 05-08-2005 3:00 PM Jianyi Zhang has replied
 Message 131 by NosyNed, posted 05-08-2005 4:01 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 132 of 305 (206163)
05-08-2005 4:19 PM
Reply to: Message 127 by NosyNed
05-08-2005 1:43 PM


Re: More specifics ?
Originally posted by NosyNed:
Generally, we are polite enough here to take the time to copy a few sentences from our sources. Since you refered to a specific view of Meyr's you should also be, at the very least, willing to supply a specific reference and page numer. If the above is something you consider fair then my suggestion to you is that you read some articles and books on speciation. Then you would not have to ask how speciation is viewed by biology.
Speciation by geographical isolation was proposed by Mayr, which is independent of NS, which is geographical isolation about. You mention geographical isolation, and does not know what it mean. I can give me exact page numbers, however, you will not understand. You neee reading books and articles to understand key points. Learning is hard and time-consuming, there is no easy way to do it.
If it acts every second (which is so extreme it may not be true but close enough to true in the big picture) then apparently you disagree wtith Mayr when you referenced him to say that NS had nothing to do with speciation.
I agree with Mayr that NS had nothing to do with speciation, and do not agree with his geographical isolation, think it also pseudo-science.
If it is always acting one can't say it didn't have anything to do with speciation.
Leaves always fall, the Earth always moves, why do they have to do something with speciation?
We have already discussed RM as the source for new material for NS to act on. Do we have to back up to cover that again? If so it will be very hard to make much progress.
I do not know what you agree. My position is that new species is outcome of RM (gross mutation) itself without NS, do you agree with it?
I find this sentence very confusing. Speciation occurs every second but they are very few and can't be found? Could you try rewording it?
I rephrase it. By ST model, new species start with gross mutation on twin zygotes in the same mom. As they are only few at birth, we do not know where they are. They proliferate and become populated with different characteristics. NS will work to keep fitted prosper.
Not all separated populations are, or have yet become, speparated species. Your example of humans is an atrociously badly chosen one.
Why is it badly chosen? Because you do not know how to answer it.
The reasons are that humans have not been separated long compared to their generation length and that there is still considerable gene flow.
Without gene flow for very long time, they are still same specie. It is your imagination to think otherwise.
I skip some fragments, as it is difficult to explain how one can falsify something.
In this case the populations are formed by spliting a population of fully interbreeding individuals. The two populations then have only the degree of genetic divergance that any individuals in a population have. In other words they are "identical" enough to operate as a single species.
Dealing with populations, ones need statistics. Two populations are never identical. You can say in terms of certain characters, their ranges, means, standard deviation are close, or statistical non-significant.
Why on earth would you suggest NS or isolation being the source of changes?
I suggest NS or isolation being the force of adapatation, not the source of new mutants.
Didn't you just say that NS doesn't create any new genetics.
new genetics? I mean new mutants.
We already both understand that mutations will produce the changes.
Yes, it is mutation, not NS that produce changes. NS only deletes ones not fitted, not generate mutants.
You really need taking some biology classes, find out what these words mean.
This message has been edited by Jianyi Zhang, 05-08-2005 04:41 PM

Jianyi Zhang

This message is a reply to:
 Message 127 by NosyNed, posted 05-08-2005 1:43 PM NosyNed has not replied

Jianyi Zhang
Inactive Member


Message 133 of 305 (206173)
05-08-2005 4:47 PM
Reply to: Message 130 by mick
05-08-2005 3:00 PM


Re: talking about mutation before
In any case your suggestion that "I" have an allele frequency is statistically misguided. My allele frequencies are either 0% (don't have the allele), 50% (heterozygous) or 100% (homozygous), just like my neighbour. I suspect that we would share many allele frequencies, if the idea of statistical similarity of allele frequency is reasonable when we are talking about a sample size of 2.
How about your neighbor family, town, city? Are they different? Are you going to become different species?
This is why your theory cannot account for the phenomena in Xiphophorus and Drosophila described by Wu and Ting.
I did in my post 123. If you do not understand, you need more schooling, and know some basic genetics.

Jianyi Zhang

This message is a reply to:
 Message 130 by mick, posted 05-08-2005 3:00 PM mick has replied

Replies to this message:
 Message 135 by mick, posted 05-08-2005 4:56 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 134 of 305 (206177)
05-08-2005 4:52 PM
Reply to: Message 131 by NosyNed
05-08-2005 4:01 PM


Re: Changing views
Please refer to Re: talking about mutation before (Message 128) and explain how your theory does account for what mick has refered to. Again you seem to have forgotten he posted and not answered the issue at hand.
I answer it in post 123. I doubt if you can understand it.
This message has been edited by Jianyi Zhang, 05-08-2005 04:53 PM

Jianyi Zhang

This message is a reply to:
 Message 131 by NosyNed, posted 05-08-2005 4:01 PM NosyNed has not replied

Jianyi Zhang
Inactive Member


Message 136 of 305 (206186)
05-08-2005 5:08 PM
Reply to: Message 135 by mick
05-08-2005 4:56 PM


Re: talking about mutation before
The existence of widespread, cheap international travel and immigration suggests that we will not witness any future speciation events in the Homo sapiens lineage. This is because of the basic population genetic principle that gene flow reduces reproductive isolation.
Many tribes has been isolated for long time before international travel and immigration. If you think they move into different species over time, that is your imagination.
You may wish to educate me by providing me with evidence that RMNS is NOT capable of generating reproductive isolation, with reference to the article by Wu and Ting.
I can not, nobody can. It is unfalsified and that is what pseudo-science means. You can not DISPROVE it. You even do not understand the questions I posted, I have nothing to say.
This message has been edited by Jianyi Zhang, 05-08-2005 05:19 PM

Jianyi Zhang

This message is a reply to:
 Message 135 by mick, posted 05-08-2005 4:56 PM mick has not replied

Jianyi Zhang
Inactive Member


Message 148 of 305 (206488)
05-09-2005 1:17 PM
Reply to: Message 144 by Wounded King
05-09-2005 6:38 AM


I use a phrase in a specific context, you then use the phase in a different but related context and I am supposed to assume they are the same? Why? I didn't specify any particular level of event so how on Earth can I assume that your estimation of the neccessary level to be either significant, or large scale in the case of the change, is the same as mine.
It is meaningless to find out what significant events are in biology, it depends on individual preference.
My position is very clear, all events, no matter it is point mutation, or change of chromosomal number, are all outcome of random mutations. NS only works on these pre-existed mutations.
It isn't as if you actually referenced any source for this data so how is one to contextualise it?
I list many of them, such as lateral transfer in bacteria, polyploids in plants, generation of asexuals from sexual animals (virgin births), generation of SARS or HIV and many virus, incorporation of mitochondria by symbiosis, etc. they all fall into instantaneous biodiversity or speciation, not gradual one by RMNS mechanism.
Well why not direct me there rather than claim that you can't show me any evidence and as a defence then claim that you couldn't show me evidence of electrons, quarks etc.. either?
In website, I list bottlenect and Mito. Eves as evidences, I copy bottleneck in following:
The cheetah is one of the most amazing animals in the cat family. As the worlds fastest animal, it has been clocked at 110 kilometers per hour for short distances. In 1900, estimated 100,000 cheetahs were estimate worldwide and had, fallen to 30,000 by 1975. In 1997, only 9,000 C 12,000 cheetahs remained in Africa.
Blood samples taken from 50 cheetahs for genetic testing revealed they were genetically identical to each other. Electrophoretic studies have shown that cheetahs are monomorphic and homozygous at many loci, thereby lacking the 10-60% polymorphisms found in other species. Furthermore, skin graft experiments in cheetahs indicated a significant lack of variability at the major histocompatibility complex.
In another similar case, the pocket gopher lives in tunnels in the American west. Researchers at the University of California, Santa Cruz found out each Humboldt gopher accepted grafts of small skin patches from other members within its own species, whereas the Carmel Valley gophers did not. To test immune function of Humboldt gophers, the researchers grafted skin from Carmel Valley gophers onto Humboldt gophers that rejected the grafts. This result suggests a uniformity of the Humboldt gopher genome.
In biology textbooks, the bottleneck effect or genetic bottlenecks are considered as the result of environmental fluctuations. According to the theory, sudden reductions in population size can alter the resulting gene pools. In the recent past, with change in environmental condition, many individuals in these animals were killed and only a small number have survived. With the drastic reduction in their population, close relatives were forced to breed, and the cheetah became genetically inbred, meaning all cheetahs are closely related. Oddly, no explanation is available to elucidate why and how such kind events only selectively kill cheetahs and leave every other big cats alive to develop its expected genetic variation.
The proposed GMCMI provides an alternative explanation: in stead of mysterious events which only selectively killed only a few types of these animals, some of the animals might be new-evolved species, the plasticity of genetic structures in the animals are very poor, they are still identical and very close to the initial stage when they were created by Nature.
These findings are just accidental findings. Since evidences are hypothesis-driven research products, nobody has done anything so far with my hypothesis, it is understandable there are only a few evidences available.
So you are choosing to draw a clear distinction between Darwinism and modern evolutionary sciece?
No, modern ToE still holds Darwinian RMNS as major reason for speciation, that is absolutely wrong. But I am more sympathetic with Darwin, as he did not know genetics then, it is reasonably for him to make the mistake. Neo-Darwinism is different, they knew everything we know. With all genetic knowledge, there is no excuse still to think Darwinian RMNS as the mechanism.
So Darwin's original formulation has a number of errors and ommissions in the light of our current knowledge, but the basic theory is still as sound as it ever was.
Since Darwin's original formulation has a number of fatal errors and ommissions in the light of our current knowledge, and the basic theory is totally wrong.

Jianyi Zhang

This message is a reply to:
 Message 144 by Wounded King, posted 05-09-2005 6:38 AM Wounded King has replied

Replies to this message:
 Message 149 by mick, posted 05-09-2005 1:48 PM Jianyi Zhang has replied
 Message 151 by Percy, posted 05-09-2005 2:46 PM Jianyi Zhang has replied
 Message 165 by Wounded King, posted 05-10-2005 9:10 AM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 150 of 305 (206512)
05-09-2005 2:09 PM
Reply to: Message 149 by mick
05-09-2005 1:48 PM


I don't understand about your theory of "Eves". How is this different to the theory of RMNS?
1) Speciation occurs at individual level, new species did not come as population at the beginning.
2) There is no NS involved at the creation, only gross random mutation is enough.

Jianyi Zhang

This message is a reply to:
 Message 149 by mick, posted 05-09-2005 1:48 PM mick has replied

Replies to this message:
 Message 156 by mick, posted 05-09-2005 7:03 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 152 of 305 (206521)
05-09-2005 2:53 PM
Reply to: Message 151 by Percy
05-09-2005 2:46 PM


Isn't much of this just copied from your Message 34?
Yes, people just do not read them, I keep repeating the old story.

Jianyi Zhang

This message is a reply to:
 Message 151 by Percy, posted 05-09-2005 2:46 PM Percy has not replied

Replies to this message:
 Message 164 by Wounded King, posted 05-10-2005 8:12 AM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 157 of 305 (206592)
05-09-2005 7:08 PM
Reply to: Message 156 by mick
05-09-2005 7:03 PM


I couldn't understand whether these are parts of the RMNS theory, or parts of your own theory.
I think it mine. There is no shadow of NS involved with speciation at all . Maybe, some Neo-Darwinists has proposed the similar one before. Let me know if it is the case.

Jianyi Zhang

This message is a reply to:
 Message 156 by mick, posted 05-09-2005 7:03 PM mick has replied

Replies to this message:
 Message 158 by mick, posted 05-09-2005 7:30 PM Jianyi Zhang has replied

Jianyi Zhang
Inactive Member


Message 159 of 305 (206601)
05-09-2005 7:51 PM
Reply to: Message 158 by mick
05-09-2005 7:30 PM


Mick:
I think Darwin one of the greatest scientists in the history, even he was not completely correct. Because of his work, people start a new direction to understand real world and ourself. He is much greater than current Neo-Darwinists. His work is a very important part of contributions made by great British people.

Jianyi Zhang

This message is a reply to:
 Message 158 by mick, posted 05-09-2005 7:30 PM mick has not replied

Replies to this message:
 Message 163 by nator, posted 05-10-2005 7:54 AM Jianyi Zhang has not replied

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