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Author Topic:   A barrier to macroevolution & objections to it
Faith 
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From: Nevada, USA
Joined: 10-06-2001


Message 1 of 303 (348261)
09-11-2006 10:40 PM


I'd like this to be more or less a continuation of the thread, What is the mechanism that prevents microevolution to become macroevolution?, on which I argued as usual for the mechanism of reduction of genetic diversity through selection and population-splitting processes, but I'd like to extend it to include the claim that mutations can overcome this barrier to macroevolution. But since it's apparently hard for the argument about the reducing processes to stick in anyone's mind, it needs to be reviewed.
On that thread at the very end, Percy said:
Percy writes:
I haven't participated very much in this thread, but since it is ending soon I just want to note that I don't think the topic of this thread has ever been addressed. There's been a lot of discussion about mutation, but as far as a mechanism preventing micro-evolution from becoming macroevolution, nothing.
I would say it's unfortunate that Percy didn't read more of the thread since he missed the whole argument that answered his walking analogy.
When the same doubt about the topic's being addressed came up earlier in the thread, Ben answered it quite well {edit: Pretty well anyway; not quite right on but close}:
http://EvC Forum: What is the mechanism that prevents microevolution to become macroevolution? -->EvC Forum: What is the mechanism that prevents microevolution to become macroevolution?
Ben writes:
I think Faith is proposing that speciation that we see is part of microevolution and is explained by allele frequency changes of isolated populations. She's denying that mutation necessarily have a role in this "microevolution", i.e. adaptation to new environments and species-specific changes due to isolation.
By doing so, she's trying to cut the bridge between such adaptation and large-scale "macroevolution". The bridge in evolutionary theory is mutation; Faith is saying microevolution won't accumulate and lead to macroevolution because microevolution can be explained by allele frequency changes ONLY and thus cuts out the bridge to macroevolution--mutation.Well, whether I can explain it or not, I think the discussion is on-topic.
Percy continues:
Percy writes:
If this topic comes up again I think the creationists need to better understand what they're claiming. An analogy would be micro-walking versus macro-walking. What keeps a micro-walk from becoming a macro-walk. Well, if you live in the continental United States, nothing prevents this. If you can walk to the store then you can walk across the country, it just takes longer. But if you live on a small desert island then the island's coastline is the limit of walking, and it makes macro-walking impossible.
This has been answered already many times by my argument. The only way the walking analogy would work at all, and then not really, is if you modify it to say that micro-walking is like a steep uphill hike in which baggage is periodically jettisoned from the backpack to make it easier, until you arrive at the foot of a sheer vertical cliff without any of the gear that would be needed to scale it (macro-walk it), because it has been jettisoned along the way. THAT is the boundary between micro-and macro-evolution, and the path to that point is the definition of the Kind.
Percy writes:
Just as an island's coast prevents macro-walking, creationists have to identify some boundary or mechanism that prevents macroevolution.
Defining that boundary is the whole point of my argument. The boundary is the fact that all the processes of evolution either maintain genetic diversity while varying frequencies of alleles, or reduce genetic diversity by eliminating alleles from new populations, the very populations considered most likely to lead to speciation, and the overall trend of this is slow reduction.
There is nothing whatever that could increase it except mutation.
Adding mutations to this is really more like interfering with a perfectly well-designed system than it is furthering anything useful, but on the assurance given by evolutionists that mutations do indeed provide useful alleles and increase genetic diversity enough and in the right direction to power evolution through to macroevolution, I've asked for evidence that this is so, and all I get is the usual short list of supposedly beneficial mutations. This does not meet the requirement, about which I'll say more in response to the following:
RickB in http://EvC Forum: What is the mechanism that prevents microevolution to become macroevolution? -->EvC Forum: What is the mechanism that prevents microevolution to become macroevolution?:
RickB writes:
Your "logical conclusion" is, in this case, not shared by others. It is an opinion.
A logical conclusion is a logical conclusion. There is no other from the premises I have assembled, which you do not bother to mention, preferring to make an unsupported pronouncement.
RickB writes:
You reject evidence of benefitial mutation whilst providing no counter-evidence.
I've rejected the evidence as insufficient and therefore no evidence at all, if it's meant to demonstrate increase in alleles and genetic diversity after speciation. To do that you'd have to actually MEASURE alleles in a population after speciation, you can't merely assume that the occasional beneficial mutation in another species is sufficient to prove this. And the ball is in your court, not mine, because I've shown that all the other processes reduce genetic diversity, so it's up to those who claim mutation overcomes this to prove it.
RickB writes:
You have also failed to define the exact nature of of a "kind", from which said "degredation" supposedly takes place.
The whole point of the discussion about all the processes that reduce genetic diversity is that they come up against a brick wall beyond which no further variation or evolution is possible. Wherever this barrier is found is the outer edge of the Kind. You may want a definition, but a barrier should do as well instead.
But also, in another thread MJFloresta suggested that a Kind might be defined by all that could be interbred even artificially, assuming that some species simply stop interbreeding from lack of inclination rather than inability, and I thought that possibly a useful way to think about it. Then kuresu posted a list of hybrids that is quite extensive, and intuitively satisfying as a suggestion for what a Kind would include, which I thought would be a great start toward a definition of the Kinds. It's not that we haven't offered some thought along these lines.
Anything that clarifies the argument about the processes that reduce genetic diversity or supports the claim that mutations overcome this effect should be on-topic in this thread.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 10 of 303 (348366)
09-12-2006 11:40 AM
Reply to: Message 4 by RickJB
09-12-2006 4:19 AM


And the ball is in your court, not mine, because I've shown that all the other processes reduce genetic diversity...
...by flatly ignoring mutation as far as I can see.
What I actually said, if you will be so kind as to review it, is "all the OTHER processes..." meaning other than mutation. I am trying to keep the focus there, not deny mutation, just keep mutation from being blurred in with these other processes in such a way that it keeps this fact obscured, that all of them reduce genetic diversity. I'm pretty sure nobody faced this fact until I started hammering away at it, and some still haven't recognized it.
There is evidence for mutation out there. The ball IS in the court, you just have to stop ignoring it.
Evidence that mutation increases alleles after speciation has been promised but not delivered, and that is where the ball remains until it is delivered. All anyone has actually offered is some paltry examples of very iffy beneficial mutations. To prove that mutation increases alleles would involve, at a minimum, COUNTING ALLELES before and after speciation.
Edited by Faith, : No reason given.

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Faith 
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Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 12 of 303 (348369)
09-12-2006 11:53 AM
Reply to: Message 9 by fallacycop
09-12-2006 11:16 AM


Re: The burden is on you
There is nothing whatever that could increase it(genetic diversity) except mutation.
That's exactly right.That's why the subtitle of the theory of evolution is often taken to be "decent with modification". Modification is essential.
Unfortunately for your claim, "modification" has historically meant not just mutation but all the processes I've been showing to reduce genetic diversity, such as migration of small populations, natural selection, bottleneck and so on. Historically these have all been listed together with mutation as "evolutionary processes," not making the distinction I've been taking pains to make.
This has been a big confusion, because these processes do bring about a change in the phenotype, new traits, and appear to be "evolutionary processes" for that reason. The fact that all they do is select from among alleles that are already present in the population, often by eliminating some altogether, implies that there's no way such a process could be the power to fuel evolution, but historically it has been treated as such. Conservationists know better. They know that selection processes, even random selection processes like migration, and certainly bottleneck, can reduce genetic diversity to the peril of the species, not what you'd call a happy prospect for macroevolution.
So, that leaves ONLY mutation for the ToE to depend upon.
Adding mutations to this is really more like interfering with a perfectly well-designed system than it is furthering anything useful,
That's just your opnion
Let's say I'm waiting for some actual evidence on which to base a change of opinion.
but on the assurance given by evolutionists that mutations do indeed provide useful alleles and increase genetic diversity enough and in the right direction to power evolution through to macroevolution, I've asked for evidence that this is so,
I think the burden is upon you to show that it isn't
I've done a very good job of showing how most of the supposed evolutionary processes work against evolution, and now I'm waiting to see evidence that mutation could REALLY move the whole shebang in the opposite direction all by itself.
Showing me that mutations exist proves nothing. I know they exist. I also know most of them do nothing useful at all, and those that do also do something destructive at the same time. Very odd idea that these examples are the evidence that is required.
and all I get is the usual short list of supposedly beneficial mutations. This does not meet the requirement,
only because you refuse to accept the evidence
I don't accept it because it doesn't meet the requirement. You want me to pretend it meets it like you all do?
Edited by Faith, : No reason given.

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Faith 
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Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 14 of 303 (348372)
09-12-2006 11:59 AM
Reply to: Message 13 by mjfloresta
09-12-2006 11:53 AM


Re: Ignoring mutation? Or taking it for what it is...
... Faith is merely trying to establish the first point which is that normal speciation events result in stasis or loss of genetic information. Since the veracity of this concept is denied by most here, it is hardly possible to proceed to the second question - namely whether mutation is a sufficient mechanism to overcome the prior loss.
Yes, thank you. And worse than that, it's not even outright denied, it's sometimes seemingly tacitly accepted when it is agreed that mutation IS the power that drives evolution. But so far nobody has shown the slightest understanding or clear unequivocal recognition of this stasis and loss of diversity in everything but mutation. There is no ground for considering mutation's possible effect until that is done.
Edited by Faith, : No reason given.

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Faith 
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From: Nevada, USA
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Message 15 of 303 (348376)
09-12-2006 12:09 PM
Reply to: Message 11 by PaulK
09-12-2006 11:53 AM


Evidence that mutation increases alleles after speciation has been promised but not delivered, and that is where the ball remains until it is delivered
What is there about speciation that would STOP mutation from producing new alleles ?
It has to produce useful alleles
It has to produce more useful alleles than deleterious or useless alleles. Evolution can't possibly have been built on a trade-off between disease and health.
It has to produce enough of them to take a new species from a state of sometimes severe genetic depletion to genetic abundance, where its parent species started many selections behind it. The development of a new species, after all, is the point at which evolution is supposed to turn to macroevolution, so if in fact the new species has a lot fewer alleles per gene than other populations from which it speciated, mutation has to restore all that, and that would only get it back to where the original population is. So it has to provide a lot more than that.
And this is a very odd situation, since speciation itself is supposed to be this launching point for macroevolution. Why then are we having to add anything in at this point, a whole bunch of mutations to make up for the loss of genetic diversity, and note well, the very loss of diversity that makes the speciation happen in the first place. There is something wrong with this picture.
Edited by Faith, : No reason given.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 18 of 303 (348383)
09-12-2006 12:23 PM
Reply to: Message 16 by PaulK
09-12-2006 12:11 PM


Re: Ignoring mutation? Or taking it for what it is...
Personally I am of the opinion that speciation usually requires mutation to produce divergence between the split population. And I have seen no argument to the contrary from Faith or any reason to suppose it is not true.
This does seem to be what people assume, and it may account for most of the confusion. Why it is assumed is a question. Is it only because it is vaguely recognized that speciation otherwise does often/usually/always deplete genetic diversity?
But breeders have always selected from traits already present, not traits that just appeared for the purpose of choosing them. You can't just assume their origin was mutation once upon a time. Natural selection selects traits already present, of course. Except for this one bacteria experiment that appears to show mutation out of the blue of a useful new trait, and that's the ONLY experiment that has shown such a thing, in a one-celled animal, really not a basis for assuming that as a normal occurrence in complex organisms. There is no reason to think that the observed changes in phenotype as a result of population split have any other basis than the expression of already- present alleles that are no longer in competition with others from the previous population.

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Faith 
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Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 48 of 303 (348446)
09-12-2006 2:41 PM
Reply to: Message 44 by RickJB
09-12-2006 2:25 PM


Re: Ignoring mutation? Or taking it for what it is...
Links have been posted all over the place in all three mutation threads. Almost every time they have been ignored.
Antibiotic resistance in bacteria
Bacteria that eat nylon
Sickle cell resistance to malaria
Lactose tolerance
Resistance to atherosclerosis
Immunity to HIV
These have been posted earlier as evidence that mutation can answer all the genetic-diversity-reducing processes. They haven't been ignored, they've been discussed and answered.

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Faith 
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Posts: 35298
From: Nevada, USA
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Message 97 of 303 (348772)
09-13-2006 2:25 PM
Reply to: Message 96 by mjfloresta
09-13-2006 2:10 PM


I agree that they can on be deduced or inferred - therein lies the rub. I'm not saying that deduction or inference are worthless. But it's a far different argument to INFER that mutations are a sufficient mechanism than to empirically demonstrate it. I think this is an important point because of the level of prominence that is claimed for ToE. Whether here at this forum or elsewhere, ToE is equated with Theory of Gravity, With round earth theory, etc..
Yes. Which it doesn't deserve because so much of it is based on mere inferences and assumptions, hypotheticals worked out on paper but not in reality.
...keep in mind that all inferences carry baggage with them, that is the paradigm that raises the inference. If we assume that all life is related, then it becomes logical to assume that there must be a mechanism to account for the diversity of life. Mutation, at first blush, does seem to fit the mold.
Yes, if you ASSUME that all life is related, then you have to ASSUME a mechanism to account for it, and mutation SEEMS to be the key. All of this is hypothetical stuff, but it is treated as if it had far more solidity than that. I can point out that all the processes of evolution IN FACT tend to reduce genetic diversity, and I'm answered with nothing but a hypothetical about how mutation can overcome that, although in actual fact the only mutations ever offered are an extremely short list of few and far between examples, two of which are in one-celled bacteria when I'm trying to discuss multi-celled chipmunks, and the vast majority of known mutations are either deleterious or it isn't known what they do if anything.
Edited by Faith, : No reason given.

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Faith 
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Posts: 35298
From: Nevada, USA
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Message 100 of 303 (348788)
09-13-2006 2:59 PM
Reply to: Message 57 by Percy
09-12-2006 8:46 PM


Percy writes:
...since he missed the whole argument that answered his walking analogy.
And judging by all the other replies, everyone else missed it, too. Because it wasn't there. You haven't identified a barrier. All you've done is argued that macro-evolution doesn't happen, and you've argued that beneficial mutations don't happen.
The micro-walking/macro-walking analogy to micro-evolution/macro-evolution makes clear the problem in your argument. Just as each step you take changes your location, each mutation changes the genome. Just as there are no limits to the number of steps one can take, there is no limit to the number of mutations a genome can experience.
The question for you becomes, if there is a limit to genomic change, a barrier of some kind, what is it? The coastline is the limit to walking on a small island. The speed of light, c, is the limit to velocity. That which provides the limit to genomic change is...?
=====
You are being way too literal-minded in your demand for a barrier with a simple definition. The barrier is the end point of sequences of the selection and population splitting processes, the point beyond which there is not enough genetic diversity to adapt further, the point at which the number of alleles for many genes are seriously reduced, sometimes down to one -- the end point of the processes that bring about change, the very processes supposed to bring about macroevolution. Barrier=inevitable point at which speciation possibilities have been exhausted due to decrease in genetic diversity. This is only seen when a population has been brought to this point, and since many haven't arrived there it can't be demonstrated for every kind, but it can be seen in some, especially in severely bottlenecked species and inbred domestic species, and these are living examples of where these processes all go.
This is assuming that mutation does nothing to appreciably increase genetic diversity, which I do asume, despite the fact that I know that mutations occur apparently quite frequently. And as usual, the best clues to this are in the dog breeding and conservation programs, where it is regularly acknowledged because it is a practical fact they have to deal with all the time, that developing new phenotypes reduces genetic diversity.
This ought simply to be acknolwedged here, but you all fight it. Clearly defined breeds USUALLY suffer from genetic depletion. What does that say about the prospects for evolution from ANY of the processes that select and split populations AND mutation? Mutations happen "frequently" -- this has been shown. Yet when you read about breeding programs, that sometimes assume hundreds and even thousands of years of selection of a breed, they don't talk in terms of mutations they can count on to save their breeds from the BAD consequences of inbreeding. They talk of the need to reintroduce alleles from other populations, not referred to as "mutations" either. Mutations are spoken of in terms of how they HARM a breed.
As in the following discussions:
Dog breeding
http://www.canine-genetics.com/pgbreed.htm
There's good stuff in those articles and I hope I get back to discuss some of it, but for now I just want to bring out a few statements from this one in which loss of alleles is discussed as a major problem:
Article, the Downside of Inbreeding
One of the results of gene pool fragmentation is loss of alleles that may exist in the breed but didn’t happen to occur in the founders for that variety. Genetic drift can cause further loss. Genes not being specifically selected for tend to "drift" out of the gene pool. Many of these will be for things so subtle they might never come to a breeder’s direct attention. A dog has some 100,000 genes, only a relative few of which are for things we can readily observe or measure. Many of these genes cause minor variations in form or bodily function. Cumulative losses of such genes through genetic drift can reduce overall health and fitness without presenting consistent or identifiable signs; a dog may seem to be a poor keeper, unusually subject to minor ailments, or lacking in endurance. Even "typical" breed behaviors, such as herding ability, can be diminished in this manner, if breeders are not using the behavior as part of their selection criteria.
The use of popular sires, particularly multiple generations of them, can accelerate loss of alleles. A dog can only have a maximum of two alleles for any given gene. Excessive use of a single individual will skew the gene pool toward the alleles that dog happened to carry. Obviously, such a dog gets heavy use because he has desirable traits. Genes for those traits will become more common, but so will those for his lethal equivalents and more subtle ills. And if a deleterious gene is "linked" (sits close on the chromosome) to a desired gene the sire carries, the breed may suddenly find itself riddled with the problem that bad gene causes. It won’t be easy to eliminate unless breeders are also willing to give up the linked desired trait.
This article discusses the fact that many alleles that are not selected are nevertheless reduced or eliminated by the process of selecting others.
Of course you know about the downside of inbreeding, but I'm saying that the implications of this fact for the ToE have not been appreciated. Why aren't breeders looking for help among all those mutations we know occur? Obviously because they don't see mutations as their friend. And of course you can answer that mutations take time. But what that means is that beneficial mutations are extremely rare, so rare that all anyone can come up with is that short list that includes the nylon eating bacteria and the antibiotic resistant bacteria and the tradeoff sickle cell malaria-protection mutation and the tradeoff HIV protection mutation and a few others. Meanwhile mutations occur very frequently and they are not a good thing.
Each individual within a breed also carries it’s own kind of load ” four or five genes for potentially fatal diseases or defects. These are called "lethal equivalents." In most cases they will not affect the individual carrying them because a single allele, or form of the gene, will be insufficient to cause the problem. But when relatives are mated, the odds of matching up those alleles increases and as does the frequency the disease.
RAZD was arguing on the other thread that even a bottleneck or founder effect will not reduce alleles. This is simply false. Why didn't anyone else answer him? Here's a straightforward statement:
Low genetic diversity is also expected if a significant bottleneck occurred at speciation.
Abstract about snail speciation
This is in the wild. Low genetic diversity is EXPECTED if a significant bottleneck occurred AT SPECIATION.
Obviously loss of alleles is an expected and observed occurrence both in breeding and in the wild.
The role of mutations to counter this, on the other hand, is merely assumed, not observed or demonstrated.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 108 of 303 (348842)
09-13-2006 4:04 PM
Reply to: Message 101 by mjfloresta
09-13-2006 3:12 PM


A barrier can be a built in limitation
Here's an analogy: Why can't I jump to the moon? What barrier prevents me from jumping to the moon? There's no barrier preventing me from jumping to the moon. I can jump an inch, I can jump ten inches. So logically it must follow that since I can jump, and there's no barrier preventing me from reaching the moon, I CAN JUMP TO THE MOON!! Of course its a ridiculous argument. My very nature (physiology, limit to strength) does not allow me to jump to the moon, whether there's a barrier or not...
I think it's fair to call your own limitations a "barrier" to jumping to the moon. When I call inevitable reduction in genetic diversity the "barrier" to macroevolution it's a similar thing -- it's something built into the system, it just exhausts itself.
If the processes of evolution deplete genetic diversity then the theory that change should just keep on happening step by step is countered by the processes of change themselves.
Edited by Faith, : No reason given.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 110 of 303 (348845)
09-13-2006 4:07 PM
Reply to: Message 107 by mark24
09-13-2006 3:51 PM


No new thread is needed
Start a new thread to discuss this claim if you wish. But this thread is about you showing that there is a barrier to evolution. Shifting the burden of proof is a logical fallacy. The claim here in this thread is not as (quoted) above, but that there is a barrier to macroevolution. It is a positive claim awaiting evidence.
This thread is not just about defining the barrier but about the various objections to such definitions of a barrier, and those objections are just as open to refutation as anything else.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 111 of 303 (348856)
09-13-2006 4:22 PM
Reply to: Message 109 by RickJB
09-13-2006 4:05 PM


mj writes:
I am not proposing a mechanism that disallows mutations from serving as the mechanism; rather I am denying the claim that mutation is a mechanism capable of accounting for life's diversity.
I detect a shifting of goalposts....
This is no shifting of anything. This is what MJ has been arguing, that mutation has not been demonstrated to do what it's claimed to do, that there is nothing but inference and assumption in support of that major doctrine of the ToE that mutation is the engine that drives it all. There is plenty of evidence that mutations occur, but none whatever that they can accomplish what the theory claims they can. The actual evidence tends in the other direction, to deleterious mutations and mutations that kill functions or have no known function, and very few that can even be shown to have a beneficial effect let alone the ability to produce what the ToE claims for them. It's ALL hypotheticals, NO actual proof.
Denying on what evidence?
On the evidence that the evidence for them is nothing but assumption and inference. On the evidence of the lack of evidence for what is claimed for mutations as capable of bringing about all life.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
From: Nevada, USA
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Message 113 of 303 (348862)
09-13-2006 4:31 PM
Reply to: Message 112 by jar
09-13-2006 4:27 PM


Re: Actually, lots of shifting going on.
Your objection is word games. The barrier has been shown.

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Faith 
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Posts: 35298
From: Nevada, USA
Joined: 10-06-2001


Message 114 of 303 (348866)
09-13-2006 4:41 PM
Reply to: Message 112 by jar
09-13-2006 4:27 PM


Re: Actually, lots of shifting going on.
People have made a claim that there is a barrier. Others have said, what barrier? If I put money aside everyday, what limits how much money gets set aside?
How much you have limits it. This is the barrier.

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Faith 
Suspended Member (Idle past 1474 days)
Posts: 35298
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Message 123 of 303 (348895)
09-13-2006 6:00 PM
Reply to: Message 117 by RickJB
09-13-2006 5:00 PM


On the evidence that the evidence for them is nothing but assumption and inference.
This isn't evidence! It's a REJECTION of evidence. A rejection of evidence does not establish your position by default.
AS I SAID, IT IS NOT EVIDENCE, it is assumption and inference only; therefore I am not rejecting evidence.
The common term for this kind of assumption is "God in the Gaps".
More like "mutation in the gaps" since I haven't mentioned God but mutation is assumed to power macroevolution when there is no evidence for its doing any such thing.
Do you or do you not have a counter-hypothesis to mutation that attempts to explain the diversity of life on the the planet and tallies with evidence from other scientific fields?
This thread is about a barrier to macroevolution, for which I've produced scientific facts and reasoned argument therefrom. You are reading things into my arguments that are not there.

This message is a reply to:
 Message 117 by RickJB, posted 09-13-2006 5:00 PM RickJB has replied

Replies to this message:
 Message 128 by PaulK, posted 09-13-2006 6:25 PM Faith has not replied
 Message 148 by RickJB, posted 09-14-2006 3:43 AM Faith has not replied

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