Randman, do you understand the implications of Wounded King's analysis in message #216?
Sequence type explicitly set to Protein
Sequence format is Pearson
Sequence 1: Wombat 381 aa
Sequence 2: Dunnart 381 aa
Sequence 3: Mouse 381 aa
Sequence 4: Woodchuck 379 aa
Sequence 5: Thylacine 381 aa
Sequence 6: Wolf 379 aa
Start of Pairwise alignments
Aligning...
Sequences (5:6) Aligned. Score: 80
Sequences (1:2) Aligned. Score: 87
Sequences (3:4) Aligned. Score: 84
Sequences (2:3) Aligned. Score: 80
Sequences (4:5) Aligned. Score: 80
Sequences (1:3) Aligned. Score: 80
Sequences (3:5) Aligned. Score: 79
Sequences (2:4) Aligned. Score: 81
Sequences (4:6) Aligned. Score: 87
Sequences (1:4) Aligned. Score: 79
Sequences (3:6) Aligned. Score: 86
Sequences (2:5) Aligned. Score: 92
Sequences (1:5) Aligned. Score: 87
Sequences (2:6) Aligned. Score: 81
Sequences (1:6) Aligned. Score: 80
I can't copy the tree so go back and look at it again.
The marsupials cluster together; the placentals cluster together. The placental wolf and marsupial thylacine show less genetic similarities to eachother than to the other members of their own suborder. The marsupial durrant and placental mouse are as genetically far apart as any pair in that sample despite some external similarities.
Your musing " It will be interesting to see, eventually, if similar physical appearance does related to similar genetic sequences or not" has already been done before your very eyes and demonstrated that there is not necessarily a relation between physical appearances and genetic sequences. Did you completly miss the point of the exercise?