One point from Andya's post struck me as interesting, although not directly in the form posted. We would reasonably expect flight, or indeed gliding as a pre-cursor, to require a strong, and flexible, muscle structure in the (to-be-)flight limbs. These pre adaptions are, surely, more likely to develop in an arboreal creature than a bipedeal runner.
Since you seem to have a pretty solid grounding in this area, I'm wondering whether you think this is a worthwhile line of argument?