No I don't deny beneficial mutations.
If you are saying that amino acid sequence can not be rearranged or truncated without losing functionYes
then you are incorrect as wellAh
That's interesting, so you can effectively cut a lot of amino acids from an enzyme and it will still function correctly? thats pretty cool
My question to you is this, what is stopping the process of random mutation and natural selection from changing amino acid sequences in a way that confers increased fitness?
Well I don't think natural selection is going to come into play until a useful sequence is reached. Until then you have to rely on random mutation just coming across a useful sequence by chance.
While obviously I have nothing to base the numbers on I can make a rough calculation to show you what my point is:
A 300 amino acid sequence has 20^300 different combinations. My understanding is that a large number of those sequences will not code for a protein useful to the organism.
Lets say there are 20^100 useful sequences (and I think that is a conservative figure) for the organism within the search space, then it appears that for every useful protein sequence there are 20^200 useless protein sequences. So I would expect all the useful sequences to be reasonably far apart, seperated by useless sequences.
My point is that if these sequences are far apart, seperated by useless intermediatery sequences, then natural selection cannot "guide" mutations to a new sequence.
Natural selection is perfectly able to improve a protein sequence, or preserve a protein sequence, but it is unable to guide a protein sequence for one function to a protein sequence for an entirely different function.
Then again it could happen by chance via lots of mutations building up and chancing upon a new sequence (but if that was the case wouldn't it be more probable that the gene was damaged eventually?). I just wonder if anyone has done the maths on this or if we simply don't have the numbers to do the maths yet
[This message has been edited by GreenBlue, 02-07-2004]